Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60g00003 ATGGATTCTTCTTCTTTAGATAATGAACAAGCAAGCCCATTCAGCAACAGAATAGATCTTGCTTTGAAGTTAAAGGGTGTTCCAAATAAGTACTCAGAGGAAGATCTTGCTAACAAGAGTGTTGACTTACTCAACTATAACCCTGTTCACAAGAAGGTACCTGTTCTTGTTCACAATGGAAACTCCATAGCTGAGTCACTTGTTATTCTTGAATACATAGATGAGGCTTGGAACAACCGTCCCTTTTTGCCACAAGACCCTTATCTTAGAGCCTTGGCACGTTTCTGGTGTAAAACCTTTGATGACGAGTTGATGGCGCGACCGCATGATCCAGAGGATGCGAGCGCGCCACCACATTTCTTAACGGCCAAGACTATGACAACCGCGCGCTCGCGCGGTGGAGGTGGCGCGTCCGCACCATAG 423 0.4634 MDSSSLDNEQASPFSNRIDLALKLKGVPNKYSEEDLANKSVDLLNYNPVHKKVPVLVHNGNSIAESLVILEYIDEAWNNRPFLPQDPYLRALARFWCKTFDDELMARPHDPEDASAPPHFLTAKTMTTARSRGGGGASAP 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60g00003 140 CDD GST_N_Tau 11 77 - -
Stsc60g00003 140 Gene3D - 83 126 - -
Stsc60g00003 140 Gene3D Glutaredoxin 2 82 - -
Stsc60g00003 140 Pfam Glutathione S-transferase, N-terminal domain 11 75 IPR004045 -
Stsc60g00003 140 SUPERFAMILY Thioredoxin-like 11 104 IPR036249 -
Stsc60g00003 140 SFLD Main (cytGST) 11 106 - -
Stsc60g00003 140 SFLD Glutathione Transferase (cytosolic) 11 106 IPR040079 -
Stsc60g00003 140 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 106 IPR045073 -
Stsc60g00003 140 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60g00003 Stsc-Chr60 8272 10350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60g00003 2 106 Glutathione S-transferase Gene Family AT2G29490 59.048 5.91e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60g00003 K00799 - gmx:547582 164.851