Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60986g00007 ATGAGGAGCAGCTGTGATGAATGGAAACCTTTTGTAGTAATGGTAGCAATTGATTTTTGTTTTGCTGCAGTGAATATTATTCTCAAGAAAGTTCTTGATGAAGGAATGAACCATTTGGTTTTAATCACATACCGATTATCAATTGCTACCATTCTCTTAGCTCCAATTGGATACTTTAGAGAAAGAAACAGTAGGCCAAGGCTCACATTTCGAGATCTATGTTACCTCTTCTTCAGTGCCATTGTGGGGGCATCAGTGACACAATATTTCTTCCTTCTGGGAATCCAATACACTTCTGCTACCTTTGCTTGTGCCTTCATTAACATGGTGCCTGTGATCACGTTCATTATGGCATTACCATTCGGGTTAGAGAGCGTGAACATCAAGTGCAAGAGTGGGAGAGCCAAGATTGTTGGGACCTTGGTGTGCATAGGAGGGGCATTGTTGTTGACACTTTATAAAGGAAAGCCCTTGTTTAATAACCACTCTTCTTATTCTGCTGCTTCTTCTTCCACAAGAACATCAAGTGGGAGAAGATGGAGCATTGGTGTTGTGGCTTTGATGTTTGGAACACTGTTCTGGTCATCTTGGTACATATTACAATCAAGCATAAGCAAGAGGTTCCCATGTCAATACTCAAGCACAGCCATAATGACTTTCTTAGGAGCCATTCAAGCAGCTACCATAAGCTTGTCCACTCAAAACCATGACTTGTCTATTTGGGTTCTCAAGGGAAAGCTTCCAATAATAGCTGTTCTGTTCTCTGGGATGATTGGATCAGGGTTATGTTTTGTGGGGATGTCATGGTGTGTGAAGAAAAGGGGTCCAGTGTTCACTGCAGCATTCAGCCCTCTTGTTCAGATCATGGCTGCCATCATTGATATCCCTTTCTTGCATGAGCAGCTACATCTTGGAAGTGTATTGGGATCAATCTTGGTGATGATGGGATTATACATTCTTCTGTGGGGTAAGAGCAAGGAGATTAAGAATCATGTTAACAAGTTAGTCCAAGAACACGCTGAAGAAATCAAGGAACAAGATCCAGAAATACAAGAACCTGCAGTTTCTTGTGATCCCCGGTGA 1083 0.4192 MRSSCDEWKPFVVMVAIDFCFAAVNIILKKVLDEGMNHLVLITYRLSIATILLAPIGYFRERNSRPRLTFRDLCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFINMVPVITFIMALPFGLESVNIKCKSGRAKIVGTLVCIGGALLLTLYKGKPLFNNHSSYSAASSSTRTSSGRRWSIGVVALMFGTLFWSSWYILQSSISKRFPCQYSSTAIMTFLGAIQAATISLSTQNHDLSIWVLKGKLPIIAVLFSGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIMAAIIDIPFLHEQLHLGSVLGSILVMMGLYILLWGKSKEIKNHVNKLVQEHAEEIKEQDPEIQEPAVSCDPR 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60986g00007 360 PANTHER WAT1-RELATED PROTEIN 9 333 IPR030184 GO:0016020|GO:0022857
Stsc60986g00007 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 326 - -
Stsc60986g00007 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Stsc60986g00007 360 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020
Stsc60986g00007 360 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60986g00007 Stsc-Chr60986 25632 27636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60986g00007 6 329 Nodulin-like Gene Family AT1G11460 38.650 2.49e-85 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60986g00007 - - gmx:100803670 547.354