Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60983g00003 ATGTTCTCGGGTTCCCAATTCGACGCCACCACCGCCTTCTCCGGCGGCGGTTTCATGGCCTCCCAATCAACCAACCTCAATGATTCATCCCCTGCACCCGCTAAAAGCCGTGAAACCCAGGGTTTGATTCCGGTGACAGTGAAGCAGATAAGTGAAGCTTCTCATTCTGGTGATGAAAAGTCGAATTTTGTGATCAATGGTATTGATGTGAACAATGTAACATTGGTTGGGATGATGTTTGAGAAAACTGAGAGAACCACTGATGTTAATTTTGTTTTAGATGATGGAACTGGACGAATCAAATGCCGAAGATGGGTCAATGAGAGTTTTGACACCAAGGAAATGGAAGAAGTACAGCCTGTGACAAATTTTGACGAGATCTCATTTCACTTTATCGATTGCATACATAACCACCTCCACTCCAAAATAAAGGTGGAAGGAATTACTCCTGCAAATCCTTCATCAGGCTCATCTTTGATCACTCCTGTCAAAAATGCATCAAATGGTTCACAGGAACCGTCATCAAATCCAGTATGA 537 0.4339 MFSGSQFDATTAFSGGGFMASQSTNLNDSSPAPAKSRETQGLIPVTVKQISEASHSGDEKSNFVINGIDVNNVTLVGMMFEKTERTTDVNFVLDDGTGRIKCRRWVNESFDTKEMEEVQPVTNFDEISFHFIDCIHNHLHSKIKVEGITPANPSSGSSLITPVKNASNGSQEPSSNPV 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60983g00003 178 SUPERFAMILY Nucleic acid-binding proteins 42 140 IPR012340 -
Stsc60983g00003 178 CDD RPA2_DBD_D 72 139 - -
Stsc60983g00003 178 FunFam replication protein A 32 kDa subunit A-like 35 120 - -
Stsc60983g00003 178 Gene3D - 34 120 IPR012340 -
Stsc60983g00003 178 MobiDBLite consensus disorder prediction 154 178 - -
Stsc60983g00003 178 PANTHER REPLICATION PROTEIN A-RELATED 118 174 IPR040260 -
Stsc60983g00003 178 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60983g00003 Stsc-Chr60983 28396 31723 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60983g00003 1 178 Core DNA Replication Machinery Family AT2G24490 42.584 1.85e-49 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60983g00003 K10739 - gmx:100802512 299.286