Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60979g00002 ATGGCTTCAGATCCAAAAATTCACAAGTTCGAAGATGTGGCAAAGCACAATCAGACCAAAGATTGCTGGCTTATTATTAACGGAAAGGTGTATGACGTCACCCCTTTTATGGATGACCATCCCGGAGGTGATGAAGTTTTGTTATCTGCAACAGGGAAAGATGCAACCACCGATTTTGAGGATGTGGGGCACAGTGATTCTGCAAGAGACATGATGGACAAATACTACATCGGGGAGATTGATGTATCAACAGTCCCATTAAAGCGCACCTACATTCCGCCGCAGCAAGCTCACTATAACCCTGACAAGACTCCAGAATTTGTGATCAAGATCTTGCAGTTCCTGGTTCCTCTCCTGATTTTGGGTTTAGCCTTTGTTGTTAGGCACTACACCAAGAAAGATTAG 405 0.442 MASDPKIHKFEDVAKHNQTKDCWLIINGKVYDVTPFMDDHPGGDEVLLSATGKDATTDFEDVGHSDSARDMMDKYYIGEIDVSTVPLKRTYIPPQQAHYNPDKTPEFVIKILQFLVPLLILGLAFVVRHYTKKD 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60979g00002 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Stsc60979g00002 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Stsc60979g00002 134 SMART Cyt_b5_2 8 81 IPR001199 -
Stsc60979g00002 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Stsc60979g00002 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Stsc60979g00002 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Stsc60979g00002 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Stsc60979g00002 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Stsc60979g00002 134 PANTHER CYTOCHROME B5 4 131 - -
Stsc60979g00002 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 91 IPR036400 -
Stsc60979g00002 134 FunFam Cytochrome b5 type B 2 85 - -
Stsc60979g00002 134 Gene3D - 2 84 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60979g00002 Stsc-Chr60979 17055 19450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60979g00002 1 134 NADPH P450 reductases AT5G53560 81.343 7.16e-82 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60979g00002 K23490 - sind:105166769 258.455