Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60964g00002 ATGCTCACCAATGGACAAGGTTGTTGGACTGACATTGCGAGGAATGCCGGCCTCCAACGATGCGGCAAGAGTTGCCGCCTCCGTTGGATTAACTACCTCCGGCCAGACCTCAAGCGCGGTGCCTTTTCGCCGCAAGAGGAAGATCTCATTGTTCATTTGCATTCCATTCTTGGTAACAGGTGGTCTCAGATAGCAGCACGTTTACCTGGCCGCACAGACAATGAGATAAAGAATTTCTGGAACTCAACACTCAAGAAGAGATTCAAACTCACCACTCATAATAATAACACCCCATCACCAAACATCACCAACAATAATAGTAGTGACGACTCTTCTTCAGATCCTAATACTAATGGAATCATGATGATCATGCACCTCAATCAACAACATGATAATCATCTCATGGCCATGTCATCATCAATGTGCATGGATTCATCATATTCTTCATCATCAACTTCTTCATCAATCTCATCCATGCAACAACAAGCAGCAGCAATGGTTTTCACTGACCAATTTAATGACCCTTTTTCTATGTTGATAGATCATAATAATAATAGCAACATGCCTCAATGCTTCATGACCCAATTTGGTGGCTTGGTAGAGAAGGGGCATAATGGGAATTATGGAATAATTATGGGGTCTAACAATAAAATGGGGCTTGAAAGAGAGCTGTCCCTTCCTCCACTAGAAAGTGACAATAGTGCCCCTATTCTTGATGTCAAAAGCCATAACAACCATTTCAATCATCATCATAATAGTATTCATCAAAAGGTCTCCAAAGTGGAGGAATTGTTTGGGTTTGGAAACAATAATAATAATTATCATCGTGGGCAGCAACAAGTGGAAAACTTGAAAATTGGAGAATGGGATTTGGAGGGTCTTATGCAAGATATCTCCTCTTTTCCTTTTCTTGATTTCCAAGTTGAATAA 930 0.4086 MLTNGQGCWTDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIVHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRFKLTTHNNNTPSPNITNNNSSDDSSSDPNTNGIMMIMHLNQQHDNHLMAMSSSMCMDSSYSSSSTSSSISSMQQQAAAMVFTDQFNDPFSMLIDHNNNSNMPQCFMTQFGGLVEKGHNGNYGIIMGSNNKMGLERELSLPPLESDNSAPILDVKSHNNHFNHHHNSIHQKVSKVEELFGFGNNNNNYHRGQQQVENLKIGEWDLEGLMQDISSFPFLDFQVE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60964g00002 309 CDD SANT 41 84 IPR001005 -
Stsc60964g00002 309 FunFam Myb transcription factor 41 88 - -
Stsc60964g00002 309 ProSiteProfiles Myb-like domain profile. 34 84 IPR001005 -
Stsc60964g00002 309 SUPERFAMILY Homeodomain-like 4 80 IPR009057 -
Stsc60964g00002 309 Gene3D - 40 114 - -
Stsc60964g00002 309 MobiDBLite consensus disorder prediction 90 118 - -
Stsc60964g00002 309 Pfam Myb-like DNA-binding domain 39 83 IPR001005 -
Stsc60964g00002 309 Pfam Myb-like DNA-binding domain 5 33 IPR001005 -
Stsc60964g00002 309 PANTHER MYB DOMAIN PROTEIN 55 1 269 - -
Stsc60964g00002 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 88 IPR017930 -
Stsc60964g00002 309 SMART sant 38 86 IPR001005 -
Stsc60964g00002 309 CDD SANT 5 33 IPR001005 -
Stsc60964g00002 309 Gene3D - 1 38 - -
Stsc60964g00002 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 33 IPR017930 -
Stsc60964g00002 309 ProSiteProfiles Myb-like domain profile. 1 33 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60964g00002 Stsc-Chr60964 10307 14194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60964g00002 1 309 MYB Transcription Factor Family AT3G08500 45.938 1.25e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Stsc60964g00002 Myb_DNA-binding 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60964g00002 K09422 - gmx:100784755 274.633