Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60956g00003 ATGGATTCTGTGAATTTGGATTGCCTCAGACCAGTGGATCATCTTTCTGAAGATCGTGAGCAGGTGTCAGATCATAGCAACATATCAGATGATGAAATCTCTAGAACAGGCATGTGTTTTGATTCTTTGGAGGAAGCTCATGATTTTTACAAGAATTATACGGAGAAAGTGGGATGTGTTATCAAGATTAGGAATACAAATCATGTGATCAATGCTAAGGGTGAGAAGATTCCAATTAATCAGTCAATCCATTGTAACCGAGAGGGAAATCGCACGTCACGGGCGAAGGCACCAAGAAGATCAAAGAAGATCGCGACTGCAATGTGCAATGCAAGGGTGTATGTCAAGTTTAACAAAGACAACAGTAAATGGTTTTACTCGATAGTTGAAGGAAAGCACTCGCATCATTGTTCTCCTGAGAAGTCCATTCAATATCATGATTATAGGCATTTGAGTATGCATGCCAAATATGTCATTGAAGACAATGATGAAGCTGGTATCTGA 504 0.3968 MDSVNLDCLRPVDHLSEDREQVSDHSNISDDEISRTGMCFDSLEEAHDFYKNYTEKVGCVIKIRNTNHVINAKGEKIPINQSIHCNREGNRTSRAKAPRRSKKIATAMCNARVYVKFNKDNSKWFYSIVEGKHSHHCSPEKSIQYHDYRHLSMHAKYVIEDNDEAGI 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60956g00003 167 Pfam FAR1 DNA-binding domain 48 138 IPR004330 -
Stsc60956g00003 167 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60956g00003 Stsc-Chr60956 24911 25848 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc60956g00003 FAR1 2e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60956g00003 - - adu:107476090 166.392