Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60950g00001 | ATGCAGAACCCTTTCTTGTTGTTGCTGTTGTCGTCATTGTTGTTCTCCTTCTGTAATGGTGGTAGTTCCAGCAGCAGGAGAATCTTGCATGAACCCTTTGTACCATTGGAAGCACACCCACCCACTGAGCCACCAAAGCCACCACCTTCTTTAAACACTACTACAAACCAAACCACACCCCAAAAACAAAACCCAAAACACCCTTCTTCTACTGCAACTACCGCCGCCTCAACCACTACCACTACCCCTACCACCACAACCACAACTACAACCACAACAACAACTACACCATATGATTCACCGTTTTTCCCAAACTACCCTTCACAGCCACCACCACCACCACAACCAACATTCACAGGCTTTGCTTCCTTCCCGGCTAACATTTCCTCGCTCATTCTTCCACATTCTCCAACTCCTACTCACTCCAATTCCAAGCTCCTCCCTGTTGCGCTTTCCGCCGTCGCCTGCGCTGTCGTTGCTGCCGCCGTTTCTGCATTTTTCTACCTTCGACGCCGTCGCCGGAACCGTGACTCTGCAGCAAACAAGGATGTCCGTCCGGAATGTAGTCGCCGGCGGGAAACCGCCGCAAAGCACCGGCAGTCTCCTACCGCCGCTGGCTCCGAGTTTCTCTACCTCGGCACTGTCGTCAATTCGCGCCGCATTGAAGGAGGCGGTAGCGGCGGCGGAGATGTCAGAGATAATAGAGGCTCGTTGAGTCGGAAATTGGAGTCGCCGGAGCTCCGGCCACTTCCGCCGCTAGTAAGGCAGATTTCGGCACCGCCGGTGGTGACGGTAGCGCAAGAGGAGGCGGAGAATGAGGAGGAAGAGGAGTCGGAGATGTTTTACTCGCCGAGAGGTTCGTCCTTGGGAGGACGCGAGAGCTCCGGCGGAACCGGATCGGGTTCCCGGCGAGCATTGTCGACAATCGCCGGTGAGAATTTCGGGGAATTGAGCTCATGTTCGGTTTCTTCCTCGAATTCCGGGTCCCCGGAGCGGTGTCACTCTATCTGCATCTCCCCGCCGGCACATCGTCCGCCGCCACCGCCACAGCAGCAAACCGTGACTTCGGTTTTGTCACCTACATTATCACCAATTCACAACCAACACATTAGTTCTTCAGGTTCTTCTTCTTATTCTTCTTCGCTTTGTTCTTCAGCATGCGCAACACCAGAGAGAGGTTTTGTTGAAGATGAACAAGAAGAAGAAGAAGATACTAATAGTAAGGCTGTTAATGTTACTGAATCTCCTTTACTTTCGCCACTTTCATTGCCACCTAATAGAGATTCGGAGGAGAAAACCCTAACTGCAAATTTGGACTCATCATCATCATCACCACCACCAAAAAACAGGGTTTCGGAAACACATGCAGCTGCATCACCAAGGAATTCTAATGTCTCCAATGGAAGTAGAAAGTCTTCATCATCAGCAGCATCACCAAGGGTATCCAATGGAAGTAGAAAGCCTTTGTCACGATCAACATCGCTAGATAGGGTTTTGAAGGCTAGTGAAGTTGCATCATTGGCCTCATCTAGGATTTCTAGTTCCTCCAATGCAAGCAGAAAATCTAAATCATTATCACAAGAGAGGAATTTGGAGGCAAATAAAGTTGCAACTGCAACTGCATCTGCATCTGCATTACCATTTGCTTCACCTCCAAGGCTATCTAATGTTTCTTCCAATGGAAGTACAAAGTTTGTGGCAACATCACCATCATCTTCGGCTTTCTCCCTGCCTTCTTCTCCGGAGAAGACGAGGAGTCATAACGGTTTTGATCAATCTCCAAGAATGTCCAGTGTCTCAGACCAGTTTAGGCAACCGGGTTTGTCTTCAGTGCCATTGTCACCATCACTGCTTTCATCACCAGAGACAGAAAGAGGGTTTAATTTCAGTGCCAGTTTCAATTCAAGTGAATCAGCAACACTTGTTAATGGTGCTTCACAGAGGAAGCATTGGGAGATTCCTGCATTGTCAACAACAACAACAAATCCATTCGGTCGATCAGGATCTATTGGTAGTGTTTTGGATCAAATCGTAGCTGTTCCCGTTACTCATCCACCACCTGTACCTCCTCAGAGGAAACAATGGGCTATTCCTGGTATCTCAACACCGCTTGCTCCGCCTCCTCCGCCTCCTCCTCCTCCACCTGCCATGACACAGCAGCAGCGGCAGCGGAAGCAGTGGGAGGTGCCATCTCCTACAACACCTGTTGGCCAATCTGTTTCGAGGCCTCCAGAGTTGAGACCTCCTTCCAGGCCTTTTGTGTTGCAGAACACAACATTGGTTTCCCCTGTTGAATTGCCCCCAAGTTCTCAGGGTTCAGTTGAAAGCGAAGAGGCTGCCAAGCCAAAGTTGAAGCCTTTGCATTGGGACAAAGTAAGGGCAAGCTCTGATCGTGAAATGGTGTGGGATCAGTTGAAGACAAGCTCTTTCAAGTTGAATGAGGAAATGATTGAAACATTGTTTGTAGCGAACATGCCAAACTCGAAACAAATGGATTCTGCGTCAGGCACAGTTCTTCCCCAATCAAGCCAGGAGGAGAAAGTACTTGATCCTAGAAAGTCCCAAAACATTGCAATCTTGCTGAGAGCACTTAATGTCACTATAGAAGAAGTGTGTGAAGCACTTTTAGAAGGTAGTGCTGATACACTTGGAGCAGAACTACTTGAAAGCTTGTTAAAAATGGCACCGAGTAAGGAAGAAGAGCGTAAATTGAAGGAATACAATGAGGACTCACCAAACAAGCTTGGTCCAGCTGAGAAATTCTTGAAGGCGTTGCTCGATGTACCTTTTGCATTTAAAAGGGTGGAAGCAATGCTTTACATAGTCAATTTTGACTCTGAAGTCGAGTATCTTAGGAAATCCTTTCAAGCTCTAGAGGCTGCCTGTGAAGAGCTGCGAAGTAGTAGAATGTTCTTGAAGCTTCTTGAGGCTGTGCTTAAAACTGGGAACCGCATGAATGTGGGGACAAACCGTGGTGATGCCCAGGCCTTCAAACTTGACACACTTCTCAAGCTGGCCGATGTCAAAGGCGCAGATGGAAAAACTACATTACTGCACTTTGTTGTACAAGAGATCATAAGAACTGAAGGTGCTCGTCTCTCCAATACTAACCAAACCCCAAACTCTTCCTTGGCGGAAGATGTTGCATGCCGGAGGCTTGGCCTGCAAGTAGTATCTAGTCTGAGTTCAGAGCTAGCAAGTGTCAAAAAGGCTGCTACCATGGATTCTGAGGTTCTCAGCAATGATGCCGCCAAGCTCTCCAAAGGGATTACAAACATTGCAGAGGTTGTACAATTGAATGAAAAAGCTGGATCAAATGAGAAGTTTACAGAATCAATGAACAAGTTCATTAGAATGGCTAAGGAAGAAATTCTGAAGATTCAAGCCCAAGAAAATGTTGCTTTGACCCTTGTGAAGGAAATCACAGAGTATTTTCATGGTGATTTGGCAAAGGAAGAAGCTCATCCATTCAGAATCTTCATGGTTGTAAGAGACTTTCTTGCAGTTCTTGACCGTGTATGCAGAGAAGTTGGTATGATAAATGAGAGAACCATGGTTAGTTCAGCACATAGATTCCCTGTTCCAGTTAATCCAATGCTTCCACAACCAGTTAACCCAATGCTTCCACAACCAGTTAATCCAATGCTTTCACAACCCTTTCACAGTGACTCTTCAGATGATGATGCTCCATCATCTTAG | 3699 | 0.4734 | MQNPFLLLLLSSLLFSFCNGGSSSSRRILHEPFVPLEAHPPTEPPKPPPSLNTTTNQTTPQKQNPKHPSSTATTAASTTTTTPTTTTTTTTTTTTTPYDSPFFPNYPSQPPPPPQPTFTGFASFPANISSLILPHSPTPTHSNSKLLPVALSAVACAVVAAAVSAFFYLRRRRRNRDSAANKDVRPECSRRRETAAKHRQSPTAAGSEFLYLGTVVNSRRIEGGGSGGGDVRDNRGSLSRKLESPELRPLPPLVRQISAPPVVTVAQEEAENEEEEESEMFYSPRGSSLGGRESSGGTGSGSRRALSTIAGENFGELSSCSVSSSNSGSPERCHSICISPPAHRPPPPPQQQTVTSVLSPTLSPIHNQHISSSGSSSYSSSLCSSACATPERGFVEDEQEEEEDTNSKAVNVTESPLLSPLSLPPNRDSEEKTLTANLDSSSSSPPPKNRVSETHAAASPRNSNVSNGSRKSSSSAASPRVSNGSRKPLSRSTSLDRVLKASEVASLASSRISSSSNASRKSKSLSQERNLEANKVATATASASALPFASPPRLSNVSSNGSTKFVATSPSSSAFSLPSSPEKTRSHNGFDQSPRMSSVSDQFRQPGLSSVPLSPSLLSSPETERGFNFSASFNSSESATLVNGASQRKHWEIPALSTTTTNPFGRSGSIGSVLDQIVAVPVTHPPPVPPQRKQWAIPGISTPLAPPPPPPPPPPAMTQQQRQRKQWEVPSPTTPVGQSVSRPPELRPPSRPFVLQNTTLVSPVELPPSSQGSVESEEAAKPKLKPLHWDKVRASSDREMVWDQLKTSSFKLNEEMIETLFVANMPNSKQMDSASGTVLPQSSQEEKVLDPRKSQNIAILLRALNVTIEEVCEALLEGSADTLGAELLESLLKMAPSKEEERKLKEYNEDSPNKLGPAEKFLKALLDVPFAFKRVEAMLYIVNFDSEVEYLRKSFQALEAACEELRSSRMFLKLLEAVLKTGNRMNVGTNRGDAQAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARLSNTNQTPNSSLAEDVACRRLGLQVVSSLSSELASVKKAATMDSEVLSNDAAKLSKGITNIAEVVQLNEKAGSNEKFTESMNKFIRMAKEEILKIQAQENVALTLVKEITEYFHGDLAKEEAHPFRIFMVVRDFLAVLDRVCREVGMINERTMVSSAHRFPVPVNPMLPQPVNPMLPQPVNPMLSQPFHSDSSDDDAPSS | 1232 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 1208 | 1232 | - | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 354 | 387 | - | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 52 | 102 | - | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 684 | 781 | - | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 37 | 51 | - | - | |
Stsc60950g00001 | 1232 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 706 | 1182 | - | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 35 | 119 | - | - | |
Stsc60950g00001 | 1232 | Pfam | Formin Homology 2 Domain | 777 | 1170 | IPR015425 | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 176 | 204 | - | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 288 | 333 | - | - | |
Stsc60950g00001 | 1232 | Gene3D | Formin, FH2 domain | 773 | 1179 | IPR042201 | - | |
Stsc60950g00001 | 1232 | PANTHER | FORMIN-RELATED | 7 | 1215 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 103 | 119 | - | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 409 | 499 | - | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 221 | 629 | - | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 1215 | 1232 | - | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 752 | 776 | - | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 719 | 740 | - | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 506 | 629 | - | - | |
Stsc60950g00001 | 1232 | SMART | it6_source | 774 | 1185 | IPR015425 | - | |
Stsc60950g00001 | 1232 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 774 | 1196 | IPR015425 | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 176 | 198 | - | - | |
Stsc60950g00001 | 1232 | MobiDBLite | consensus disorder prediction | 701 | 718 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60950g00001 | Stsc-Chr60950 | 1207 | 5848 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60950g00001 | 97 | 299 | FH2 protein (formin) Gene Family | AT3G25500 | 42.478 | 3.99e-19 | 92.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60950g00001 | - | - | ahf:112744322 | 1628.22 |