Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60946g00002 ATGATGATAACAATGGAGGAGCTCCTACCACTATTGTCAACACTGAAATTGAGCACCATGATCAGCGTGATTGGTGTGGTGGTTCTCTTATGGTGGCTGTGGAGTGCACTCAAGTGGGTGTGGCTCAAACCAAAGAGCATAGAGAGGCGTCTCAGGCAGCAGGGCTTAAAGGGAAATTCATACCGTCCTTTGGTTGGTGACATTAGAGACATGATTAAGATGATCAAGCAAGTTAAGTCCACACCCATGGATCCTCATTCCAACGAGATTGCTCCTCGAGTTTTGCCCTATGTTGTCCACACCATTGCTAAATACGGGAAGAGTTCATTTATGTGGCTTGGTCCAACACCGAGGCTATTCATCTTGGACCCGGATAAAATCAGAGAAATAACTAATAAGGTATATGAATTTCAAAAGCCTGATACAAGCCCACTTTTCAGGCTTCTTGCATCAGGCTTTGCAACTTATGATGGTGATAAGTGGGCCAAACACAGGAAGATCGTAAGTCCTGCATTCAATGTCGAGAAAATGAAGATGCTGGTACCGATATTCGTTGAGTGTTGTGATGAGATGATAAGCAAATGGGAGAATGAATTAGGATCTTGTGAAGGGCCACGTGAGATGGATGTATGGCCTTCCATACAAAATGTGTCAAGCGATGTTCTGGCTCGTGCAGGCTTTGGAAGCAGCTATGAGGAAGGAAAGAGAGTTTTCCAGCTTCAAAGAGAGATGCTTACACTCACAATGACACTCTTCAAATTTGCTTTCGTTCCAGGCTACAGGTTTCTGCCAACACATACCAATAGAAGGATGAAAGCTATTGACAAAGAAATAAGAGAAGCACTAATGGCTATTATCAACCGAAGATTGAAACTAATAAAAGCAGGGGAGCCTACAAACAATGACTTGTTGGGCATACTTTTGGAATCAAATCACAAGGCAGAGTCTGAGAAAAACAGCAGTGGTGGAATGAGTTTAAGAGACGTTGTGGAAGAAGTGAAACTGTTTTACTTAGCTGGGCAGGAAGCCAATGCAGAGTTGCTAGTGTGGACCATGTTACTGCTAAGCAAGCATCCTGATTGGCAAGCAAAGGCCAGAGAGGAAGTTTTTCAAGTCTTTGGAAATGAAAAGCCAGACTACGACAAGCTAGCGCAACTAAAGATTGTGCCAATGATTCTACAAGAGAGCCTGAGGTTATATCCACCAGTGGTTATGTTCGCTAGATTCCTACGCAAAGATGCAAAGCTTGGAGACCTCACAATTCCAGCAGGGGTGGAACTTGTAGTGCCTATATCAATGCTACACCAAGATAAGGAATTTTGGGGTGATGATGCAAAGGAGTTCAAGCCAGAGAGGTTTGCTGAAGGAGTATCAAAGGCAACAAATGGAAAACTTTCATACATGCCATTTGGATGGGGTCCTAGACTCTGCATTGGCCAAAACTTTGGATTGTTAGAGGCTAAGATTGCTGTGTCCATGATCTTGCAACGTTTCTCATTTGAGTTGTCACCTTCTTATACTCATTCTCCTTCCTTTATTATTACGCTTCAGCCCGAGCGTGGGGCACACCTTATGTTACAAAATTTGTAA 1590 0.4333 MMITMEELLPLLSTLKLSTMISVIGVVVLLWWLWSALKWVWLKPKSIERRLRQQGLKGNSYRPLVGDIRDMIKMIKQVKSTPMDPHSNEIAPRVLPYVVHTIAKYGKSSFMWLGPTPRLFILDPDKIREITNKVYEFQKPDTSPLFRLLASGFATYDGDKWAKHRKIVSPAFNVEKMKMLVPIFVECCDEMISKWENELGSCEGPREMDVWPSIQNVSSDVLARAGFGSSYEEGKRVFQLQREMLTLTMTLFKFAFVPGYRFLPTHTNRRMKAIDKEIREALMAIINRRLKLIKAGEPTNNDLLGILLESNHKAESEKNSSGGMSLRDVVEEVKLFYLAGQEANAELLVWTMLLLSKHPDWQAKAREEVFQVFGNEKPDYDKLAQLKIVPMILQESLRLYPPVVMFARFLRKDAKLGDLTIPAGVELVVPISMLHQDKEFWGDDAKEFKPERFAEGVSKATNGKLSYMPFGWGPRLCIGQNFGLLEAKIAVSMILQRFSFELSPSYTHSPSFIITLQPERGAHLMLQNL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60946g00002 529 CDD CYP72 95 525 - -
Stsc60946g00002 529 PANTHER CYTOCHROME P450 FAMILY MEMBER 31 520 - -
Stsc60946g00002 529 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60946g00002 529 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60946g00002 529 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60946g00002 529 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60946g00002 529 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60946g00002 529 FunFam Cytochrome P450 734A1 41 529 - -
Stsc60946g00002 529 SUPERFAMILY Cytochrome P450 93 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60946g00002 529 Pfam Cytochrome P450 103 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60946g00002 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Stsc60946g00002 529 Gene3D Cytochrome P450 40 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60946g00002 529 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60946g00002 529 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60946g00002 529 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60946g00002 529 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60946g00002 Stsc-Chr60946 5077 9176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60946g00002 18 529 Cytochrome P450 AT3G14690 51.953 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60946g00002 - K24179 gmx:100801959 872.463