Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60942g00004 | ATGGAAGCGCTTATAAGAGGACGTGGTTTTGCAAATCAACTTCTTCAAGTTGTTGGTGGTAATAAAAATAATCATAATAATGATGATAATGGAGAAGAGGTAATAGCTGAAGATCTTGTGAGAAAGGTACTCAGATCTTTCAACAACACCATTCTGCTTTTGAACGGTGATTCACTTTCTGGTGGTGGCGCTTCCTCGGCAAGTCCAAACCCTAAGAAGTTTGAAGGAAATGGAACCATCAATCATCAATCACCAAGGTACAAAAAAAGGAAAACTTTATCAACACCAACATGGGAGAAGGAAAGCTCAACTCTTATGGATGATGGCTATGCTTGGAGAAAATATGGACAAAAACTTCTAATAAATTCCAATTACCACAGGAACTACTTCAGGTGCAGTTACAAGTTTGATGAAGGTTGTGAAGCAACCAAACAGGTTCAAAGAATTCAAGAGGATCCTCCATTGTACCGTACAACATATCATGGCCACCACACTTGCAAGAACAAATTATTACAAAATTACCCAAATGATGATGAGATGATCCTGATGGATTGTTATTACTGTGATGCTCCTCAACAAGACTCTTGCATGGTGCTTGATTTCAGTAGTGATCCTTTATTAATTTCCCAATAA | 633 | 0.3791 | MEALIRGRGFANQLLQVVGGNKNNHNNDDNGEEVIAEDLVRKVLRSFNNTILLLNGDSLSGGGASSASPNPKKFEGNGTINHQSPRYKKRKTLSTPTWEKESSTLMDDGYAWRKYGQKLLINSNYHRNYFRCSYKFDEGCEATKQVQRIQEDPPLYRTTYHGHHTCKNKLLQNYPNDDEMILMDCYYCDAPQQDSCMVLDFSSDPLLISQ | 210 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60942g00004 | 210 | MobiDBLite | consensus disorder prediction | 60 | 94 | - | - | |
Stsc60942g00004 | 210 | MobiDBLite | consensus disorder prediction | 60 | 83 | - | - | |
Stsc60942g00004 | 210 | SMART | WRKY_cls | 106 | 168 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc60942g00004 | 210 | Gene3D | WRKY domain | 93 | 168 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc60942g00004 | 210 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 32 | 171 | IPR044810 | GO:0003700 | |
Stsc60942g00004 | 210 | Pfam | WRKY DNA -binding domain | 107 | 167 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc60942g00004 | 210 | ProSiteProfiles | WRKY domain profile. | 101 | 164 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc60942g00004 | 210 | SUPERFAMILY | WRKY DNA-binding domain | 103 | 167 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60942g00004 | Stsc-Chr60942 | 27715 | 30627 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60942g00004 | 1 | 166 | WRKY Transcription Factor Family | AT3G56400 | 35.165 | 3.25e-30 | 111 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Stsc60942g00004 | WRKY | 3.5e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60942g00004 | - | - | aip:107610898 | 171.4 |