Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60942g00002 ATGGATATAATGGGTGGTTCCTCGACGGCAGCAAGCCCTTGTTCGTCTTACCACCCAAGTCCCTGTGCTTCCTACAACCCTAGCCCTGGCTCATCATCCTTCCCAAGCCCATCAAGATCTCCCTATGCATCGAATCATCCCAACGGCGATGGCAATTCCCTCATTCCATGGCTCAAGAACCTCTCCACTGCCTCCTCCTCCGCTTCATCCCCTAAGCTCCCTCACCTCTACCTTCAGAATGGCTCCATCAGCGCACCCGTCACGCCGCCCTTGAGCTCTCCAACTGCCAGGACACCAAGGATGAATGTTGATTGGGGCAATCAATCTGGACGGCCAGGGTCAGGGTGGACTGGAGGACAACACTACTCATTCCTGCCATCCTCTAGTCCTCCTAGCCCTGGCCGCCAGGTGGTCGACCCTGAATGGTTTGCCGGCATCAAGCTCCCCCATGTTAACCCAACTTCCCCTACATTCACCCTTATGTCCTCAAACCCTTTTGCCTTCAAGGAAGAGGGTTTGGCTCGAACCGGCTCTCGCATGTGGACTCCTGGACAGAGTGGGACGTGCTCTCCGGCTTGCCGGCAGGTTCTGATCACACCGCTGACATTCCGATGTCCGAGGCTGTCTCGGATGAATTCGCATTTGGGGGTAATGCATCCGGCCTTGTGA 669 0.562 MDIMGGSSTAASPCSSYHPSPCASYNPSPGSSSFPSPSRSPYASNHPNGDGNSLIPWLKNLSTASSSASSPKLPHLYLQNGSISAPVTPPLSSPTARTPRMNVDWGNQSGRPGSGWTGGQHYSFLPSSSPPSPGRQVVDPEWFAGIKLPHVNPTSPTFTLMSSNPFAFKEEGLARTGSRMWTPGQSGTCSPACRQVLITPLTFRCPRLSRMNSHLGVMHPAL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60942g00002 222 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 194 IPR033264 GO:0003700|GO:0006351|GO:0009742
Stsc60942g00002 222 MobiDBLite consensus disorder prediction 1 47 - -
Stsc60942g00002 222 MobiDBLite consensus disorder prediction 83 135 - -
Stsc60942g00002 222 MobiDBLite consensus disorder prediction 83 134 - -
Stsc60942g00002 222 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 62 IPR008540 -
Stsc60942g00002 222 MobiDBLite consensus disorder prediction 8 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60942g00002 Stsc-Chr60942 2714 4413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60942g00002 1 192 BZR Transcription Factor Family AT1G78700 61.500 9.27e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Stsc60942g00002 BES1_N 3.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60942g00002 - - gmx:100795369 288.5