Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60942g00001 ATGACTTCAGGGACTCGGCTTCCGACATGGAAGGAGAGGGAGAACAACAAGAGGAGAGAGAGGAGGAGAAGAGCCATAGCAGCAAAGATCTTCGCTGGTCTAAGAATGTACGGAAACTTCAAGCTCCCAAAGCACTGTGACAACAATGAAGTCCTCAAAGCTCTCTGCAATGAAGCTGGTTGGACCGTTGAACCAGATGGCACCACTTACCGCAAGGGATGCAAGCCTTTGGAGCGCATGGATATAATGGGTGGTTCCTCGACGGCAGCAAGCCCTTGTTCGTCTTACCACCCAAGTCCCTGTGCTTCCTACAACCCTAGCCCTGGCTCATCATCCTTCCCAAGCCCATCAAGATCTCCCTATGCATCGAATCATCCCAACGGCGATGGCAATTCCCTCATTCCATGGCTCAAGAACCTCTCCACTGCCTCCTCCTCCGCTTCATCCCCTAAGCTCCCTCACCTCTACCTTCAGAATGGCTCCATCAGCGCACCCGTCACGCCGCCCTTGAGCTCTCCAACTGCCAGGACACCAAGGATGAATGTTGATTGGGGCAATCAATCTGGACGGCCAGGGTCAGGGTGGACTGGAGGACAACACTACTCATTCCTGCCATCCTCTAGTCCTCCTAGCCCTGGCCGCCAGGTGGTCGACCCTGAATGGTTTGCCGGCATCAAGCTCCCCCATGTTAACCCAACTTCCCCTACATTCACCCTTATGTCCTCAAACCCTTTTGCCTTCAAGGAAGAGGGTTTGGCTCGAACCGGCTCTCGCATGTGGACTCCTGGACAGAGTGGGACGTGCTCTCCGGCTTGCCGGCAGGTTCTGATCACACCGCTGACATTCCGATGTCCGAGGCTGTCTCGGATGAATTCGCATTTGGGGGTAATGCATCCGGCCTTGTGA 906 0.5486 MTSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIMGGSSTAASPCSSYHPSPCASYNPSPGSSSFPSPSRSPYASNHPNGDGNSLIPWLKNLSTASSSASSPKLPHLYLQNGSISAPVTPPLSSPTARTPRMNVDWGNQSGRPGSGWTGGQHYSFLPSSSPPSPGRQVVDPEWFAGIKLPHVNPTSPTFTLMSSNPFAFKEEGLARTGSRMWTPGQSGTCSPACRQVLITPLTFRCPRLSRMNSHLGVMHPAL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60942g00001 301 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 273 IPR033264 GO:0003700|GO:0006351|GO:0009742
Stsc60942g00001 301 MobiDBLite consensus disorder prediction 162 214 - -
Stsc60942g00001 301 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 141 IPR008540 -
Stsc60942g00001 301 MobiDBLite consensus disorder prediction 162 213 - -
Stsc60942g00001 301 MobiDBLite consensus disorder prediction 100 126 - -
Stsc60942g00001 301 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60942g00001 Stsc-Chr60942 63 4413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60942g00001 1 271 BZR Transcription Factor Family AT1G78700 69.286 3.97e-104 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Stsc60942g00001 BES1_N 1.1e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60942g00001 - - gmx:100795369 421.394