Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60934g00003 ATGGCATCAACATTGTCTAGCACTGTTGTTAAGCCAACACCTTTCCTTGGCCAAGGAAAGGGAACCAACACCAACACTCTCAGAGATGTTGTCTCCATGGGAACTGGGAAATACACCATGGGGAATGAATTGTGGTATGGGCCAGATAGAGTGAAATACTTGGGACCCTTTTCTGCTCAAACACCTTCATATTTGACTGGAGAGTTCCCTGGAGATTATGGATGGGACACTGCTGGTTTATCTGCTGATCCTGAAGCTTTTGCCAAGAATAGGGCTCTTGAGGTGATCCATGGGCGTTGGGCTATGCTTGGAGCACTAGGTTGCATCACCCCAGAAGTTCTTGAGAAGTGGGTCAGAGTTGACTTCAAGGAGCCTGTTTGGTTCAAAGCTGGGGCCCAAATCTTCTCAGAGGGTGGGCTTGACTACCTTGGAAACCCTAACCTTGTCCATGCACAAAGCATCCTTGCAGTGTTGGGCTTCCAAGTAGTCCTAATGGGCCTTGTTGAAGGGTTCCGCATTAATGGGCTTCCTGGTGTTGGAGAAGGGAACGACCTCTATCCTGGTGGTCAGTACTTTGACCCATTGGGCCTTGCTGATGACCCAGTTACTTTTGCTGAGCTAAAGGTCAAGGAGATCAAGAATGGAAGGCTTGCTATGTTCTCCATGTTTGGGTTCTTTGTTCAGGCCATTGTCACTGGTAAAGGCCCATTGGAGAACCTTTTGGACCACCTTGATAACCCTGTGGCTAACAATGCCTGGGTTTATGCCACCAAGTTTGTGCCTGGTTCTTAG 792 0.4848 MASTLSSTVVKPTPFLGQGKGTNTNTLRDVVSMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60934g00003 263 FunFam Chlorophyll a-b binding protein, chloroplastic 52 256 - -
Stsc60934g00003 263 SUPERFAMILY Chlorophyll a-b binding protein 44 260 - -
Stsc60934g00003 263 Pfam Chlorophyll A-B binding protein 62 229 IPR022796 -
Stsc60934g00003 263 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 12 262 IPR001344 GO:0009765|GO:0016020
Stsc60934g00003 263 Gene3D Chlorophyll a/b binding protein domain 52 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60934g00003 Stsc-Chr60934 12471 13785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60934g00003 5 262 Chloroplast and Mitochondria Gene Families AT2G05070 67.790 8.25e-124 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60934g00003 K08914 - qsu:112007400 523.087