Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60928g00004 ATGGAGTTTTGTGCTGGAGGGAACCTTGCTTCTTATCTTCGATGCCATGGCAGAGTTCAACAACAAACTTCCAGAACATTCATGCAGCAGCTTGATGCTGGTATGAAAATATTACAAACTCATGGTATCATCCATAGAGATTTGAAACCAGAGGAAGGGATTGTGCTTGGCCTTGGTGAGGAAATAGAAGCATTGCTCTCTTTTTCCCAGAGTGTTTGTTCTGAGTCTGTTAGGAGGGTGCAGCATATGTTGGTTCAACATAGTATGCTTTGTTCTCTGCATAACAACTTCCCTCTCAACAGAGCACTAGCACTCTCCCTCACTGTAAGCTTCAATGGCATCAGCAGGGCACTCTACATACTCGCTGCCAATTCAATAGACCCTACAAGGTTGTTTTGTTTATTTATTTATTTATTTTCCCTTGATGCAACAGGCTCGAAGCACTACCAAGTTTTAATTATTATATATGTGCTTGCTTTCTTTGATAGTACTTTAACTTAG 501 0.4072 MEFCAGGNLASYLRCHGRVQQQTSRTFMQQLDAGMKILQTHGIIHRDLKPEEGIVLGLGEEIEALLSFSQSVCSESVRRVQHMLVQHSMLCSLHNNFPLNRALALSLTVSFNGISRALYILAANSIDPTRLFCLFIYLFSLDATGSKHYQVLIIIYVLAFFDSTLT 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60928g00004 166 Gene3D Transferase(Phosphotransferase) domain 1 1 58 - -
Stsc60928g00004 166 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60928g00004 166 Pfam Protein kinase domain 1 51 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60928g00004 166 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 1 51 IPR045269 GO:0004674|GO:0006914
Stsc60928g00004 166 SUPERFAMILY Protein kinase-like (PK-like) 1 51 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60928g00004 Stsc-Chr60928 16528 18052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60928g00004 95 129 Nodulin-like Gene Family AT4G19450 74.286 1.57e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Stsc60928g00004 Pkinase 1.4e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60928g00004 - - lja:Lj1g3v1289070.2 95.1301