Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60917g00005 ATGGGTTCAAACAGTACAGGATGCCCCGCAGGAATGAAAGCGACGTCGAATGGGGTGTTTCAGGGAGACAATCCCCTTGACTACGCACTCCCTCTTGCTATCTTACAAATCTGCATGGTGGTGCTTCTCACTCGTCTCCTTGCCTTCCTTCTCAAGCCAATAAGGCAACCTCGTGTCATTGCAGAAATTGTCGGTGGAATCTTGCTCGGTCCATCAGCTCTCGGACGCAGCACCGCCTTTCTAAACGCCGTCTTCCCATCCAAGAGCCTAACGGTTTTGGACACTCTGGCCAACATCGGTCTACTTTTCTTCATGTTCCTCGTAGGACTCGAGCTCGACCCTAAGTCTCTGATTAGCAAAACAGGAAAGAAAGCTCTTGCCATTGCCCTCGCGGGGATCACATTCCCCTTCGTCTTGGGAATCGGGACATCTTTTGCACTTCGTGCAACCATCTCTGAGGGCGTAGATAAGGCACCTTTCTTTGTGTTCATGGGAGTCGCACTCTCCATCACCGCATTCCCTGTTCTGGCACGCATCTTGGCTGAGCTGAGACTCCTTACAACTGATGTTGGAAGGATGGCCATGTCAGCAGCGGCTGTTAATGACGTGGCAGCGTGGATTCTTCTCGCCCTTGCAATTGCACTCTCTGGCTCTAACTCTTCTCCGCTTGTCTCTGTTTGGGTCCTCCTCTCTGGATGCGCCTTTGTAATCTGTTGCGCACTTGTTCTTCCTCCAATCTTCAAGTGGATGTCTCAGCGCTGCTCTGAAGGGGAAGCCGTTAACGAGTCCTATGTGTGTGCCACCTTGGCTACGGTATTGGCAGCTGGTTTTGTCACGGACACTATTGGCATCCATGCTCTGTTTGGGGCTTTTGTCGTTGGAGTTGTTCTTCCTAAGGAAGGCCCTTTTGCTGCTGCTCTTGTTGAGAAGGTTGAGGATCTTGTTTCTGGTCTCTTCCTTCCGTTGTACTTTGTGTCCAGTGGACTCAAGACAAATGTAGCCACCATTCGTGGCCTTAAGTCATGGGGGCTCCTTCTTTTGGTCATATTCAATGCTTGCTTCGGTAAGATTGTTGGTACCATTGTTGTCTCCTTTCTTTGTAGGGTACCCTTTCAAGAATCATTGGCTCTCGGCTTTCTCATGAATACTAAGGGATTGGTAGAGCTCATCGTCCTCAACATTGGTAAAGATAGGAAGGTATTAAATGACCAAACCTTTGCAATTATGGTGCTGATGGCTATCTTTACAACATTCATGACAACTCCTTTGGTAATGGCAGTTTATAAACCGGCCAAGAGAATGGCTAAAGCTGACTACAAATACAGAACAATTAAGAGGAAAAACCAGGACACTCAACTGAGACTCATGGTGTGTTTCCACAGCACAAGGAACATCCCTTCAATGCTAAATCTAATTGAAGCCTCGCGGGGCACTGAAAAGAGGGAAGGGCTTTGCATATACGCATTGCACCTCATGGAGCTCACCGAAAGGCCTTCTGCTATATTAATGGTCCACAAAACCAGAAAGAATGGATTACCCTTTTGGAACAAAGGCCGCCGCCATAATAACAACCACTCAGATGCGAATCAAATAGTGATAGCCTTTGAGGCTATGGAGCAGCTAAGCAGGGTGTCCATTCGTCCCATGACTGCAATCTCATCCATTCCCAACATTCACGATGACATATGCGCCTGTGCTGAGAGCAAGAGGGTTGCAATGGTGATTCTGCCATTTCACAAGCACCCAAGGGTTGATGGAACGTGGGAAACAACAAGAAGTGAATTCAGGTGCGTGAATAAGAGAGTTCTCGAGCATGCACCCTGCTCTGTAGGGATCTTGGTGGACCGGGGGCTTGGTGGGACCACCCACGTGGCAGCAAGTAATGTTTCATCTTCAATGACCATGCTCTTCTTTGGAGGCAACGACGATCAAGAAGCGCTTGCTTATGCTCTGAGAATGGCAGAGCATCCTGGTATCAATCTAACCATAGTGCACTTGATAGTGAGGTCCGAGGATGTTGGAGACATTGTCAGTGTCGTAGATATAAACGACAACCCATCATCATCAACGGATGAGATGCTTCTCTCTGAGGTGAAAGCAAATATTTGTGGAAAGAGCTCATCCATAAAGTTTGAAGAGAGAGGCGTGAAAAGCCTCGGTGAGATAATTGAGGTGGTTGGAGAGTACAGCAGAGGGTGCAACTTGTTTGTGGTTGGTAGGATGCCCAAAGGACACGTGGCGGTCACTTTGAACAATGTGAAATGCGAGTGTCCAGAATTGGGCCCACTCTGTAACTTGTTGACCTCTCCGGATCTGCTCTCAACTTCAGCCTCGGTTTTGGTCGTGCAACACTATCATGCTCTCTGA 2367 0.4833 MGSNSTGCPAGMKATSNGVFQGDNPLDYALPLAILQICMVVLLTRLLAFLLKPIRQPRVIAEIVGGILLGPSALGRSTAFLNAVFPSKSLTVLDTLANIGLLFFMFLVGLELDPKSLISKTGKKALAIALAGITFPFVLGIGTSFALRATISEGVDKAPFFVFMGVALSITAFPVLARILAELRLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSNSSPLVSVWVLLSGCAFVICCALVLPPIFKWMSQRCSEGEAVNESYVCATLATVLAAGFVTDTIGIHALFGAFVVGVVLPKEGPFAAALVEKVEDLVSGLFLPLYFVSSGLKTNVATIRGLKSWGLLLLVIFNACFGKIVGTIVVSFLCRVPFQESLALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFMTTPLVMAVYKPAKRMAKADYKYRTIKRKNQDTQLRLMVCFHSTRNIPSMLNLIEASRGTEKREGLCIYALHLMELTERPSAILMVHKTRKNGLPFWNKGRRHNNNHSDANQIVIAFEAMEQLSRVSIRPMTAISSIPNIHDDICACAESKRVAMVILPFHKHPRVDGTWETTRSEFRCVNKRVLEHAPCSVGILVDRGLGGTTHVAASNVSSSMTMLFFGGNDDQEALAYALRMAEHPGINLTIVHLIVRSEDVGDIVSVVDINDNPSSSTDEMLLSEVKANICGKSSSIKFEERGVKSLGEIIEVVGEYSRGCNLFVVGRMPKGHVAVTLNNVKCECPELGPLCNLLTSPDLLSTSASVLVVQHYHAL 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60917g00005 788 Gene3D - 476 750 - -
Stsc60917g00005 788 Pfam Sodium/hydrogen exchanger family 39 424 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc60917g00005 788 Gene3D - 32 438 IPR038770 -
Stsc60917g00005 788 FunFam Cation/H(+) antiporter 15 32 435 - -
Stsc60917g00005 788 PANTHER CATION/H + ANTIPORTER 7 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60917g00005 Stsc-Chr60917 26435 29081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60917g00005 1 787 Antiporter Super Family AT4G23700 68.040 0.0 1067
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60917g00005 K26731 - qsa:O6P43_034301 1139.41