Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60911g00003 ATGGGGTCTCAAGGTGGTGGTGAAAGTAATGGTAAGCATGCACAGCTCCAGCCTTTGGCGCGGCAAAACTCATTGTACAGTCTCACGCTCGACGAGGTTCAGAATCAGTTAGGGGACTTAGGAAAGCCCCTAGCTAGTATGAACCTCGATGAGCTTCTAAAAAATGTATGGACTGCCGAGGCCAACCAGTCTTTAGGCATGGACATTGACCGAACAACACAAGCCAATCAAGCTGCACTGCAGCATCAAGCTAGTCTATCAATAACTAGTGCACTAGGCAAGAAGACGGTTGACGAGGTTTGGAGAGATATCCAGCAAAATAAAGATAATAACGAGAAGAAGTCTCGAGAGAGACAAGCTACATTAGGGGAGATGACATTGGAGGCTTTCTTGGCGAAAGCTGGGGTCGGGATTGTTGCCGAACCATCATGTAATACTAAAAGTGCCGGTCCTTTAGCTGTTGCTGATTCTAATTTAACAGCACCACCGTTTCCTCCACAAGGTCCAATGATGCAATATGCGCAACCACAATATCCGCATCCTCAGCAAAGTTTAATGGGGATGTATATGACTGGCCCGAGCATAGCACAGCCGTTGCACATGGGGGCTGGTGCTGCGTTGGATGTTCCCTATGCTGATGGTCAGGTGGCAATGCCTTCACCTTTGATGGGAACCTTGTCCGATACGAAGATACCTGGGAGGAAAAGGGGGACACCGGAGGACATAATGGAGAAGACGGTGGAAAGGAGGCAGAAGAGGATGATCAAGAATCGGGAATCTGCTGCTCGTTCTAGAGCAAGGAAGCAGGCTTACACAACTGAATTAGAGAATAAAGTGTCGCGCTTGGAAGAGGAAAATGAAAAGCTGAGGAAACGAAAGGAACTAGAGAACATGTTGTCTAGTGCGCCCCCACCACCGCAACCCCGATACCAGATTCGCCGAACATCATCTGCGTTGTTCTGA 963 0.486 MGSQGGGESNGKHAQLQPLARQNSLYSLTLDEVQNQLGDLGKPLASMNLDELLKNVWTAEANQSLGMDIDRTTQANQAALQHQASLSITSALGKKTVDEVWRDIQQNKDNNEKKSRERQATLGEMTLEAFLAKAGVGIVAEPSCNTKSAGPLAVADSNLTAPPFPPQGPMMQYAQPQYPHPQQSLMGMYMTGPSIAQPLHMGAGAALDVPYADGQVAMPSPLMGTLSDTKIPGRKRGTPEDIMEKTVERRQKRMIKNRESAARSRARKQAYTTELENKVSRLEEENEKLRKRKELENMLSSAPPPPQPRYQIRRTSSALF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60911g00003 320 Coils Coil 265 299 - -
Stsc60911g00003 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 247 292 IPR004827 GO:0003700|GO:0006355
Stsc60911g00003 320 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 247 299 - -
Stsc60911g00003 320 SUPERFAMILY Leucine zipper domain 249 294 IPR046347 GO:0003700|GO:0006355
Stsc60911g00003 320 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 317 IPR043452 GO:0003700|GO:0045893
Stsc60911g00003 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 252 267 IPR004827 GO:0003700|GO:0006355
Stsc60911g00003 320 MobiDBLite consensus disorder prediction 251 320 - -
Stsc60911g00003 320 SMART brlzneu 245 301 IPR004827 GO:0003700|GO:0006355
Stsc60911g00003 320 CDD bZIP_plant_BZIP46 249 295 - -
Stsc60911g00003 320 Gene3D - 247 301 - -
Stsc60911g00003 320 Pfam bZIP transcription factor 249 294 IPR004827 GO:0003700|GO:0006355
Stsc60911g00003 320 MobiDBLite consensus disorder prediction 251 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60911g00003 Stsc-Chr60911 31301 35568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60911g00003 12 320 bZIP Transcription Factor Family AT3G56850 52.188 9.90e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc60911g00003 bZIP_1 2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60911g00003 K14432 - qsu:111991766 448.358