Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60899g00014 ATGCAAGAAGCATCCCTCAATAACTACTATTTACTCCCTAATAATAACAACAATACAAATTTAAACCCATCTCCATACCCAACCACAACAATTCAAAACAACAATAACAACACTCATCATCATAATTACCAAAGTTTCTTGAACCAAATATATGGGAATTTCCAAAACTACCCTCAGCAATTGTTCTCTGAGTTCATAAGCAGCCCTCAGAGCAGCAACTCAACTTCGGACGAAGCAGAGGAGCAGCAGCTGAGCCTGATCAACGAGAGGAAGCACCGGCGAATGATATCGAACCGCGAGTCGGCTCGGAGATCGAGGATGAGGAAGCAGAGGCACCTTGATGAGCTGTGGTCACAGGTGGTCTGGCTAAGGAACGAGAACCACCAGCTCATGGAGAAGCTCAACCATGTCTCTGACTGCCATGAACAAGCTCTTCAAGAAAATGTTCAGCTCAAAGAAGAAGCTTCAGAGCTTCGTCAGATGCTCAGTGACATGAAGATTCATAGCCCTGCTTCTTCTTTCCCTCAACAAATTCCTTTTGAAGATCTTCCTTCTTCCTCCTCAAACCAATCTGTTTCAAGTTCCATGGATCTTATTGCTTAA 603 0.4378 MQEASLNNYYLLPNNNNNTNLNPSPYPTTTIQNNNNNTHHHNYQSFLNQIYGNFQNYPQQLFSEFISSPQSSNSTSDEAEEQQLSLINERKHRRMISNRESARRSRMRKQRHLDELWSQVVWLRNENHQLMEKLNHVSDCHEQALQENVQLKEEASELRQMLSDMKIHSPASSFPQQIPFEDLPSSSSNQSVSSSMDLIA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60899g00014 200 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 139 IPR004827 GO:0003700|GO:0006355
Stsc60899g00014 200 MobiDBLite consensus disorder prediction 67 82 - -
Stsc60899g00014 200 SMART brlzneu 86 150 IPR004827 GO:0003700|GO:0006355
Stsc60899g00014 200 SUPERFAMILY Leucine zipper domain 90 139 IPR046347 GO:0003700|GO:0006355
Stsc60899g00014 200 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 93 108 IPR004827 GO:0003700|GO:0006355
Stsc60899g00014 200 Pfam bZIP transcription factor 90 148 IPR004827 GO:0003700|GO:0006355
Stsc60899g00014 200 Gene3D - 88 144 - -
Stsc60899g00014 200 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 10 172 IPR044521 -
Stsc60899g00014 200 MobiDBLite consensus disorder prediction 67 88 - -
Stsc60899g00014 200 MobiDBLite consensus disorder prediction 170 200 - -
Stsc60899g00014 200 CDD bZIP_plant_GBF1 91 141 IPR045314 GO:0003700|GO:0006355
Stsc60899g00014 200 FunFam BZIP transcription factor 88 139 - -
Stsc60899g00014 200 Coils Coil 141 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60899g00014 Stsc-Chr60899 36629 37324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60899g00014 5 181 bZIP Transcription Factor Family AT3G30530 53.723 1.89e-49 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc60899g00014 bZIP_1 1.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60899g00014 - - aprc:113867865 211.846