Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60898g00003 ATGACCTTCAAGCGCAGGAACGGTGGAAGAAACAAGCATGGCCGTGGCCACGTCAAATTCATCCGCTGCTCCAATTGCGGCAAGTGCTGCCCCAAGGACAAATCAATCAAGAGGTTTCTTGTGAGGAACATTGTTGAACAGGCTGCAGTTCGTGATGTTCAGGAAGCCTGTGTTTATGAGCAATACACTCTTCCGAAGCTGTATGTGAAGATGCAGTATTGTGTTTCATGTGCTATCCACTCTCACGTTGTGAGGGTGCGTTCTCGCACTGATAGGAGGAACCGTGAGCCTCCACAGCGCTTTGCCAGGCGCAGGGATGATGCACAGAGGCCCGGTCAACCTGGTCAGGCACCTCGTCCTGCTGGAGCGGGAGCTGCTCCCCGAGCTTAA 390 0.5359 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFARRRDDAQRPGQPGQAPRPAGAGAAPRA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60898g00003 129 MobiDBLite consensus disorder prediction 89 110 - -
Stsc60898g00003 129 Gene3D Ribosomal protein S26e 1 115 IPR038551 -
Stsc60898g00003 129 MobiDBLite consensus disorder prediction 86 129 - -
Stsc60898g00003 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 123 IPR000892 GO:0003735|GO:0005840|GO:0006412
Stsc60898g00003 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Stsc60898g00003 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Stsc60898g00003 129 FunFam 40S ribosomal protein S26 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60898g00003 Stsc-Chr60898 23999 25388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60898g00003 1 116 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 83.621 6.25e-69 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60898g00003 K02976 - qsa:O6P43_020111 196.438