Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60897g00004 ATGGCTGGATTGGACATTGATGAAGGTGGTGGTGGTGGAGTTTTAACAGATTACTCTCCAAGCAGTGTAGAATCAAGAACACCTACATCTTCAAGAGCAAGCACTTCAGATTCTGAGGCTCTACCAGGAAGTGGTGGTTTCAGAGAAGGTGGTGGTACTAATCCTAACAACCAATGGCGTGGTTTCTTCAAGCTTCTCAAGAAAGGGTCACAGATGCCATTTCAAACATTTCACCCTCTTAAGAGTGTTCCTAAGTTAACTAGGAGGAAGAGTAAGAGGGTTAGGGAGGATCTTATTCCTTCTCCAGCTTTGAATTCTTCTTTTGACTCTGACTTTGCCAGCTTCAAATCTTCATGGAAGAATTTCACTCTCTCTGAACTCCAGGCTGCAACTGATGACTTCAGCCATGATAATGTGATTGGGGAGGGAGGGTATGCAGAGGTATACTTAGGGAAATTGGAAGATGGGAACTTTGTTGCCATAAAGAAGCTGACAAGAGGGAACCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGGATTATAGTTCATGTGGACCATCCAAACATTGCTAGATTGATTGGATATGGTGTTGAAGGTGGAATGTTCCTTGTTCTTCAGCTCTCTCCACATGGCAGCTTATCATCCATACTTTATGGGCCTAGAGAGAAGCTGAATTGGAGTCTGAGATTTAAGATTATCATGGGAACTGCTGAGGGACTTTGCTATCTCCATGAGGGATGTCAAAGAAGGATCATTCACAAGGATATCAAGGCTTCTAACATTCTTCTCTCTGAGACTTTTGAGCCTCAGATATCTGATTTTGGCCTAGCAAAATGGTTACCTGACCAATGGACTCACCATACTGTGTCCAAAGTCGAAGGCACATTCGGGTACCTTCCCCCTGAATTCTTCATGCATGGTATAGTAGATGAGAAAACTGATGTGTATGCATATGGTGTGCTATTATTGGAGCTAATAACTGGAAGACAAGCTTTGGATAGTTCACAGAAAAGCCTTATTATGTGGGCAAAGCCTTTGTTAATTGCAAACAACATCAAAGATATTGTTGATCCAGTTCTAGAAGATAACTATGATAAAGAGCAGATGAACCTTGTGATCTTAATAGCTTCTCAGTGTATAGAGCAATCCTCGGCTCAACGGCCGCTTATGAGCGAGGCATGTTCGTTCTCTTTTATCTGTCACTGTCATTTTTCGTTCGCGAAAATACTAAAGCATTGTTAG 1248 0.4207 MAGLDIDEGGGGGVLTDYSPSSVESRTPTSSRASTSDSEALPGSGGFREGGGTNPNNQWRGFFKLLKKGSQMPFQTFHPLKSVPKLTRRKSKRVREDLIPSPALNSSFDSDFASFKSSWKNFTLSELQAATDDFSHDNVIGEGGYAEVYLGKLEDGNFVAIKKLTRGNQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWSLRFKIIMGTAEGLCYLHEGCQRRIIHKDIKASNILLSETFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLIMWAKPLLIANNIKDIVDPVLEDNYDKEQMNLVILIASQCIEQSSAQRPLMSEACSFSFICHCHFSFAKILKHC 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60897g00004 415 ProSiteProfiles Protein kinase domain profile. 134 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60897g00004 415 PANTHER OS08G0249100 PROTEIN 29 396 IPR046958 -
Stsc60897g00004 415 Pfam Protein kinase domain 136 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60897g00004 415 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 211 403 - -
Stsc60897g00004 415 Gene3D Phosphorylase Kinase; domain 1 106 208 - -
Stsc60897g00004 415 SUPERFAMILY Protein kinase-like (PK-like) 119 406 IPR011009 -
Stsc60897g00004 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Stsc60897g00004 415 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 104 208 - -
Stsc60897g00004 415 SMART serkin_6 134 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60897g00004 415 Gene3D Transferase(Phosphotransferase) domain 1 211 402 - -
Stsc60897g00004 415 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Stsc60897g00004 415 MobiDBLite consensus disorder prediction 18 41 - -
Stsc60897g00004 415 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60897g00004 Stsc-Chr60897 7947 9914 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60897g00004 106 396 Receptor kinase-like Gene Family AT1G53420 40.468 9.78e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Stsc60897g00004 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60897g00004 - - gmx:100776081 626.706