Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60896g00006 ATGGCGAGAACGAGGTTGAAGGTGCTTTCAACCCTAGACACAGCAAGGACACAGTGCTATCACTTTAAGGCCATCATAATTACCGGCATGGGGCTCTTCACCGACGCCTACGACTTTTTCGCCATCACGGTGGTCATCCGGATAATTGGAAGGGTGTACTATGGTGACCACCATGCCGACAATTACAATAAGGAAAGAATCCCTCCTGTTGTGGAGTCTGCTTTAGTGGCCGTTGCCCTAACAGGAGCGGCCACAGGGCAACTAGTTTTTGGTAGACTCGGCGACCTCAAAGGGCGTCGTTGGGTCTATGGACTCGCCTTGCTGCTCATGGTTTTTGGCTCTTTGGGATGTGGCTTCTCCATTTGCATTACAAGAACATGCGTTCTCCTGAGCCTAGGCTTCTTCAGGTTCTTACTGGGGCTAGGGATTGGAGGAGACTACCCTCTATCATCAACAATCATGTCCGAATTTGCCAACAAGAAAACAAGAGGCTCTTTTATAGCGGCGGTTTTCTCCATGCAGGGTTTCGGAATTTTGTTAAGTGCCACCGTCACCATAATAGTGTGCTCCATATTCCGCCATGCCGCTGGCTCAGCTAAGCACTCTCTGCTGGGACCGCCACCGCCTGCGGCTGACTTAGCATGGAGGTTGATACTTATGTTCGGTTCAATTCCGGCAGCCATGACTTACTACTGGCGTAGGTTGATGCCCGAAACAGCCAGGTACACAGCGTTAGTGGAACAAAACGTGATGCAAGCAGCAAATGACATGGAGAAAGTGATGGATATCTCACTCACTCAGATTGTTGAAGAAGAAAACCTACCTCCACGCTCTAATTACGCTCTGTTTTCTAAAGAATTCTTTCGGAGACATGGTTCTGATCTCTTTGCTTGCGCTTTTAATTGGTTTCTGGTGGACACTGTTTTCTACAGCAGCATCCTATTCCAATCTCAAATATACAAAATCGAAAACATAGATAAGGTGGATGTGTACCAAGAGGCCATTGCTATCGCTACGCTCCAAGCAAAAATTGCTGTGTGTTCCACCATCCCTGGCTACTTCTTCTCGGCGTATTTCATTGACCGTGTCGGAAGAGTTAGGCTCCAAATGATGGGTTTCTTCTTCATGGCATTGGCATTTTTTGCCATAGGGATTAAGTATGATTCATACTGGACCAAGAAAAGTCACAAATATGGTTTCTTGGTCCTGTATGGTGTTGCTTTCTTTTTCGCTAATTTTGGACCCAACACCACGACATTTATAGTCCCGGCAGAGCTTTTTCCAGCTAGGTTTAGGTCAACGTGTAATGGCATATCTGGTGCAGCTGGCAAGATTGGTGCGATCGTCGGATCGGTAGGGTTTCTCTGGGCGTCTCATGGCAAGAGTGAGGATCGAGAGGGGTTTCCTCATTCTGTAGGAATTGGAATGAATGCATCATTGTGCATTCTTGGAGGAGTGTGCTTGGTGGGTGTGGTTGTCACCACTTTTTTCACCAAAGAAACCATGGGAAGGTCTTTGGAAGATAATGAGACTGAGCCTCTAGAAACTGAGGAAATGAATGATCTTTGA 1569 0.4704 MARTRLKVLSTLDTARTQCYHFKAIIITGMGLFTDAYDFFAITVVIRIIGRVYYGDHHADNYNKERIPPVVESALVAVALTGAATGQLVFGRLGDLKGRRWVYGLALLLMVFGSLGCGFSICITRTCVLLSLGFFRFLLGLGIGGDYPLSSTIMSEFANKKTRGSFIAAVFSMQGFGILLSATVTIIVCSIFRHAAGSAKHSLLGPPPPAADLAWRLILMFGSIPAAMTYYWRRLMPETARYTALVEQNVMQAANDMEKVMDISLTQIVEEENLPPRSNYALFSKEFFRRHGSDLFACAFNWFLVDTVFYSSILFQSQIYKIENIDKVDVYQEAIAIATLQAKIAVCSTIPGYFFSAYFIDRVGRVRLQMMGFFFMALAFFAIGIKYDSYWTKKSHKYGFLVLYGVAFFFANFGPNTTTFIVPAELFPARFRSTCNGISGAAGKIGAIVGSVGFLWASHGKSEDREGFPHSVGIGMNASLCILGGVCLVGVVVTTFFTKETMGRSLEDNETEPLETEEMNDL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60896g00006 522 CDD MFS_PhT 25 474 - -
Stsc60896g00006 522 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 22 507 - -
Stsc60896g00006 522 SUPERFAMILY MFS general substrate transporter 12 510 IPR036259 -
Stsc60896g00006 522 ProSitePatterns Sugar transport proteins signature 2. 138 163 IPR005829 GO:0016020|GO:0022857|GO:0055085
Stsc60896g00006 522 Pfam Sugar (and other) transporter 26 510 IPR005828 GO:0016020|GO:0022857|GO:0055085
Stsc60896g00006 522 Gene3D MFS general substrate transporter like domains 20 521 IPR036259 -
Stsc60896g00006 522 FunFam Inorganic phosphate transporter 1-6 20 522 - -
Stsc60896g00006 522 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 502 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60896g00006 Stsc-Chr60896 30364 33968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60896g00006 5 517 Inorganic Solute Cotransporters AT1G76430 59.168 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60896g00006 K08176 - gmx:100803834 663.685