Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60896g00005 ATGGCGAGGAAGAGGTTGAAGGTGCTTTCAGCCCTTGATACGGCAAAGACACAATACTATCACTTCAAGGCTATTATAGTTGCTGGGATGGGTCTCTTCACCGATTCCTATGACCTCTTCTCCATCACCCTCATCACCAAGATAATCGGAAGGGTCTACTACGCCGACGACCGCGACCTCACCGACAGAAAACTATACGTAACCCCACCTGTGGTATTGTCTGCCTTGGTGGTCGTTGCCCTACTGGGAGCGGCCATTGGGCAAATCGTGTTCGGTAGACTCGGCGACCTTAGAGGTCGTCGCCCAGTCTACGGACTCGCTTTGTTGCTCATGGTGTTTGGCTCCTTGGGAAGTGGTTTTTCCATTTGTGTCAAAAGAACATGTGTTCTCCTCAGTTTAGGTCTCTTCAGGTTCTTATTGGGGCTAGGGATTGGAGGAGACTACCCTTTATCATCAACAATTATGTCTGAATTTGCCAACAAAAAGACAAGAGGCTCTTTTATAGCGGCGGTTTTCTCCATGCAGGGTTTCGGCATATTGGCAAGTGCTACCGTCACTATAGTGGTGTCCGCCATATTCCGCCTCGCCCCGGACGCCAAAGACAAACAACATACTGCCGCGGCGGCCGACTTCGCGTGGAGGTTGATCCTCATGTTGGGGTCAGTCCCGGCGGCGTTGACTTACTACTGGAGAATGATGATGCCCGAAACTGCCAGGTACACAGCATTAGTGGAACATAATGTGATGCAAGCAGCAAAGGACATGGAGAAAGTGATGGACATCTCACTCACCCAAATCATCGAAGAAAACTTACCACCGTCACCAATCTCATCACATTCCGATGATGACTACTCACTCTTCTCCAAGGAGTTCTTCCGCCGCCATGGCCGCGACCTCTTCGCTTGTTCCATCAATTGGTTTTTGTTGGACATTGTGTTCTACAGCAGCATCCTCTTCCAATCTCATATATACTCCATCAAACTCAAGGACAAACAAGATCTTGATGTTTATCAAGAAGCCTTTGACATTGCCAGGCTCCAAGCAATCATTGCTGTGTGTTCCACCATCCCCGGTTACTTCTTCTCTGTGTATTTCATTGATCGTATTGGAAGAGTTAAAATCCAAATGATGGGTTTCTTCTTCATGGCATTGGCATTCTTCGCCATGGGAATTCCTTATTATTCATATTGGAATGCCGATAAGGAGGACAAGCCTAGGAATAACGGTTTCTTGGTCCTTTATGGTGTCGCTTTCTTCTTCGCAAACTTTGGACCCAACACGACGACTTTTATCGTCCCGGCCGAGCTTTTCCCGGCAAGGTTTAGGTCGACATGTCATGGAATTTCGGGAGCGTTTGGGAAGATCGGGGCAATCATCGGATCGGTAGGGTTTCTTTGGGCTTCTCGGGACGAGACGGAACGAGACAGCGATGGATATGGAGTGAATGGAATTGGAAAGGTAGCTTCTTTGTGCATGCTTGGAGGGGTTTGTTTAGTGGGTGTGGTTACCACCTTTTTATTTACCAAGGAAACCATGGGAAGGTCCTTGGAAGAGAATGAGACTGAGTGA 1569 0.4818 MARKRLKVLSALDTAKTQYYHFKAIIVAGMGLFTDSYDLFSITLITKIIGRVYYADDRDLTDRKLYVTPPVVLSALVVVALLGAAIGQIVFGRLGDLRGRRPVYGLALLLMVFGSLGSGFSICVKRTCVLLSLGLFRFLLGLGIGGDYPLSSTIMSEFANKKTRGSFIAAVFSMQGFGILASATVTIVVSAIFRLAPDAKDKQHTAAAADFAWRLILMLGSVPAALTYYWRMMMPETARYTALVEHNVMQAAKDMEKVMDISLTQIIEENLPPSPISSHSDDDYSLFSKEFFRRHGRDLFACSINWFLLDIVFYSSILFQSHIYSIKLKDKQDLDVYQEAFDIARLQAIIAVCSTIPGYFFSVYFIDRIGRVKIQMMGFFFMALAFFAMGIPYYSYWNADKEDKPRNNGFLVLYGVAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKIGAIIGSVGFLWASRDETERDSDGYGVNGIGKVASLCMLGGVCLVGVVTTFLFTKETMGRSLEENETE 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60896g00005 522 Gene3D MFS general substrate transporter like domains 20 267 IPR036259 -
Stsc60896g00005 522 Gene3D MFS general substrate transporter like domains 273 522 IPR036259 -
Stsc60896g00005 522 CDD MFS_PhT 25 511 - -
Stsc60896g00005 522 ProSitePatterns Sugar transport proteins signature 2. 139 164 IPR005829 GO:0016020|GO:0022857|GO:0055085
Stsc60896g00005 522 SUPERFAMILY MFS general substrate transporter 12 520 IPR036259 -
Stsc60896g00005 522 Coils Coil 516 522 - -
Stsc60896g00005 522 Pfam Sugar (and other) transporter 26 520 IPR005828 GO:0016020|GO:0022857|GO:0055085
Stsc60896g00005 522 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 512 IPR020846 GO:0022857
Stsc60896g00005 522 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 517 - -
Stsc60896g00005 522 FunFam Inorganic phosphate transporter 1-6 20 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60896g00005 Stsc-Chr60896 22839 26473 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60896g00005 5 522 Inorganic Solute Cotransporters AT1G76430 59.772 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60896g00005 K08176 - gmx:100797683 679.863