Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60888g00001 ATGGGAGATATCTTGCCATCTCCATGCTTTAACATGTTTGTGTCTGATAGACTTCGAATGTGGCATACCAGTAATATCTTAGATACACACCTTCCTATGCTTGCCTTTCAAGTTTTCTACACCATATTAGTTGGCCGTCTCATCTTCTATGCATTCAAACCTCTTCATCAACCCCGCATTATTTCATACGTCCTTGTTGGTTTTCTGCTAACTCCACCTCTCCTGGGGAACATTCCAGCAATCTTTCACTTCATTTACCCTGTGAATGGAATAATCACACTTGAAGTTCTAGCACATTTTGGCCTCATCTACTACGCTTTCCTCAACGGGGTCGAAATGAACTTAGATACAATTCTGAAATCCAAGAAAGAAGCTACAAGCATTGCAGCCATTGGAATCATCTTTCCTGTTATAATGGGACCGGGATTATATGCCCTGCATCGAAAATTCTATCTCAATAACTCATTCAAGCTTGAAGAACTTTCAAGCCATGCTTATTTGATTTGGACTTTGGTTCTCACAGTTACAGGCTTTCCAAACCTTGTTGAAATCCTCTCCGAGCTGAAGCTTCATTACACCAGCTTAGGCAAAGTTGCATTAACCGCTGCAATGATTAGTGACACATACAACTGGATTCTCTTCACATTGTTGGTGCCATTTTCAATTGACAGTTCAAATGCAATTTATTCAGTGCTGTCCACGGTTTTATTCCTCATCGTGTGCATCTTTCTGGTGCGCCCTATACTCACAAAGATCATTGAAAGCAAGATGGAAAATGATGAATTGGATGAGTACCAGCTCCTTTTTGTGTTGATGGGGCTTCTTGTGTGTTCTTACATTACAGACATTCTTGGCACACATAGCATTGTTGGTGCTTTTGTGTACGGACTCATTTTGCCTCATGGGAAGTTTGCTGATTTGGTTATGTCTGTTTCTGATGATTTCGGCGGTGGGTTTCTGGCGCCGCTTTACTTCTCCGGCAATGGAATGAAGCTTATATTGAAGTCTGTTTTTGCTCATGCAAATTGGCCATTGACATTGCTGGTTTTGGTCTTAGCATGTGTCACAAAGATATTAGGAACTCTTTTTGCTACCTCCTTATTTGGTAGGCCTACTAGAGATGGTTTTGCTATTGGATTGCTTCTTAACACCAAAGGGGCTTTGGCACTAATCATGCTAAACATTGCTTGGGATAAGATGATATTTTTTGCACCAACCTATGCAGTCCTCACTGCTTCTGTTCTTCTAATGACTATAGTGGTTTCACCCATCATCAACTTCATGTTCAAGCCAAGAAAGAGATTTCAGCAGAACAAGCTAAGAACCATACAAAAGCTAAGAGCCAATGCAGAGCTTCGAATCATTGCATGTGTCCACAGCAATCACCACGCCACAAGCATGGTCAACATCCTTGAACTTTTCAATGCTACTAGACTCTCCCCAATCCATGTCTTCAGCTTCTACCTTGTTGAAATCACACAACGTGCAGCAGCACTAGTAGTTGCTCACATGGACAAGCCAAGCTCCCAGTTCGGAGTTCAGAACAATAATCTCACCAAGTCCCAAGTCGAGTTAGAAAACATTGCATACACCTTCAAGGCTCTTGGGAATGGAGATGGACACGATGCTTTCAGAGTTGACACCATGAGCGTGGTGTCATCCTATGAAACCATTCACAAGGATATATACATCTCTGCAAGAGAAAGAGCCAGCAGCTTGATCCTCCTTCCATTCCACAAACAGTCAAGTCAAGATGGTAACAACTCGCTTGAAACAACCAATGCTGTGTACAGAGACATAAACAAGAATGTGATGCAAGATGCACCTTGTTCTGTGGGACTATTCGTGGATCGCGATCTTGGGACGTTCACTAAGATGTATGTTCATGTTGTTATGCTCTTTGTTGGAGGCCCAGATGATCGTGAAGCTTTGGCAATTGCATGGAAGATGGCGGGACACCCGAGGGTTCAGCTATCAATGATTAGAATTTGCTTGTTTGATGAAGCTGCAAAAGAAACAACTCATTCTGAAGAAGGACAAGGGATATTAGAAAATGTGATGGATAATGATAAGCAGAAGGAGTTGGATGATGAGTATATAAGTAAGTTCAGATACACTGCAGTGAACAATGAGGATTCTATATCATACTCAGAGGTTGATGTTCATAAAGGGGAAGATATTCCAAGGATATTGAAGGAGATTGATGAGAAAGGGTGTGATTTGTATGTGGTTGGACAAGGGAATTGCAGGAACTCAATACTGTTCTCAAATTTAATGGAATGGTGTGATTGTTTGGAGCTAGGTGTAATTGGGGATATTTTAGCATCAAATGTGTTTGGTTCAAAGTCATCAATTTTAGTGGTTCAACAATATGGTTTTGGGCGGATGAAATTAGAGAGGAAACAACGGCAGGTGATAGGTAATAGTGGACGCTTTGGGACACTAGTTGTGACTACTGAATAA 2463 0.4141 MGDILPSPCFNMFVSDRLRMWHTSNILDTHLPMLAFQVFYTILVGRLIFYAFKPLHQPRIISYVLVGFLLTPPLLGNIPAIFHFIYPVNGIITLEVLAHFGLIYYAFLNGVEMNLDTILKSKKEATSIAAIGIIFPVIMGPGLYALHRKFYLNNSFKLEELSSHAYLIWTLVLTVTGFPNLVEILSELKLHYTSLGKVALTAAMISDTYNWILFTLLVPFSIDSSNAIYSVLSTVLFLIVCIFLVRPILTKIIESKMENDELDEYQLLFVLMGLLVCSYITDILGTHSIVGAFVYGLILPHGKFADLVMSVSDDFGGGFLAPLYFSGNGMKLILKSVFAHANWPLTLLVLVLACVTKILGTLFATSLFGRPTRDGFAIGLLLNTKGALALIMLNIAWDKMIFFAPTYAVLTASVLLMTIVVSPIINFMFKPRKRFQQNKLRTIQKLRANAELRIIACVHSNHHATSMVNILELFNATRLSPIHVFSFYLVEITQRAAALVVAHMDKPSSQFGVQNNNLTKSQVELENIAYTFKALGNGDGHDAFRVDTMSVVSSYETIHKDIYISARERASSLILLPFHKQSSQDGNNSLETTNAVYRDINKNVMQDAPCSVGLFVDRDLGTFTKMYVHVVMLFVGGPDDREALAIAWKMAGHPRVQLSMIRICLFDEAAKETTHSEEGQGILENVMDNDKQKELDDEYISKFRYTAVNNEDSISYSEVDVHKGEDIPRILKEIDEKGCDLYVVGQGNCRNSILFSNLMEWCDCLELGVIGDILASNVFGSKSSILVVQQYGFGRMKLERKQRQVIGNSGRFGTLVVTTE 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60888g00001 820 PANTHER CATION/H + ANTIPORTER 24 791 - -
Stsc60888g00001 820 Gene3D - 33 439 IPR038770 -
Stsc60888g00001 820 Pfam Sodium/hydrogen exchanger family 41 429 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60888g00001 Stsc-Chr60888 819 3651 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60888g00001 20 791 Antiporter Super Family AT2G13620 36.688 1.27e-175 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60888g00001 - - gmx:100804266 1072.77