Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60886g00006 ATGGGTTTTCGTCTATCCGGTATCATAAGAAAGGCATCATCTACTTCATATTCAAAAGCTATGGAAGTGCCAAAGGGTTATCTTGCAGTTTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCTATATCATACTTGAACCAGCCTTCATTTCAAGACTTGCTAAGTCAAGTTGAGGAAGAATTTGGGCCTCAATATGGGTCCAAACCCATTCAAAGCTTTGTTAAACATTCCTCCGTTCATCATTTCTTCTTCCTTCATCCCCATTCTGGTCTGGTATGCGGCGGAGGAGAGCTGCTTCCGTGGCGGAGGGGTGGAGGTGGTGTACAACCAGGTGGGGCTACTGAAGCAATGGCGGACACAGGAGGTGTCAGGGGGCCAGGACGTGGTAGCAGACGACGGAAGCGAGCAGCAGCGGAGGCGGCGGCGGCGGCAGCAGATATGTATCGTCTTGATCAAGTCTCACACGTTGCAGCATCACTACACAAAAAGGTAAGTTATTATGCTTGA 510 0.4863 MGFRLSGIIRKASSTSYSKAMEVPKGYLAVYVGEKMKRFVIPISYLNQPSFQDLLSQVEEEFGPQYGSKPIQSFVKHSSVHHFFFLHPHSGLVCGGGELLPWRRGGGGVQPGGATEAMADTGGVRGPGRGSRRRKRAAAEAAAAAADMYRLDQVSHVAASLHKKVSYYA 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60886g00006 169 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 14 63 IPR003676 GO:0009733
Stsc60886g00006 169 Pfam Auxin responsive protein 16 65 IPR003676 GO:0009733
Stsc60886g00006 169 MobiDBLite consensus disorder prediction 110 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60886g00006 Stsc-Chr60886 29244 30571 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60886g00006 22 63 Calmodulin-binding Proteins AT5G20810 59.524 9.64e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60886g00006 - K14488 gmx:100789280 98.2117