Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60886g00002 ATGCACCTCCTCTTGCCTTCAAAAATAGCACAAGTCATTGGCATCCTCAAGCATCAACATTTAGACACATTCTTCTTAGAATTGAGAGCTTTGCCTTGTTCTCCTTCTATTAGTCCAATACAAAAGATGGGTTTCCGTTTACCTGCTATTCGAAGGGCTTCCTTCTCTGCTAGCCAATCACCTTCAAAATCCTTGGAAGTCCCAAAGGGGTATCTTGCAGTGTATGTTGGAGAGAAACTGAAGCGTTTTCTGATCCCCGTTTCGTATTTGAATCAACCATCATTCCAAGACTTGTTGAATCAAGCCGAGGAAGAATTTGGATATGATCATCCCATGGGTGGTCTCACAATTCCTTGCAGTGAAGATGCTTTTTGA 375 0.4213 MHLLLPSKIAQVIGILKHQHLDTFFLELRALPCSPSISPIQKMGFRLPAIRRASFSASQSPSKSLEVPKGYLAVYVGEKLKRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCSEDAF 124
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc60886g00002 124 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 60 124 IPR003676 GO:0009733
Stsc60886g00002 124 Pfam Auxin responsive protein 51 124 IPR003676 GO:0009733
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc60886g00002 Stsc-Chr60886 10463 10837 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60886g00002 27 124 Calmodulin-binding Proteins AT3G43120 46.465 7.95e-21 80.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60886g00002 - K14488 gmx:100786685 142.51