Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60882g00006 ATGGATGGTCATACACAAAAATGGTTAGAAAGGGCGAAGCCATTCATAGGTGTGATTTTCTTGCAGTTTGGATTTGCCGGCATGGATGTTCTATCAAAGGCTGCACTCAACAAGGGAATGAGCAATTATGTTCTTGTTGTTTATCGCCATGTTGTTGCCTTCGTTGTCATAACCCCTTTTGCATTAATCATAGACAAAAAAGTGAGGCCAAAGATGACATTTTCAATCTTTATGAAGATGGTGGCGCTAAGCATACTAGAGCCAGTTATTGATCAGAATTTATACTTTTTGGGAATGAAATACACAACAGCAACCTTTGCTGCTGCCATGACCAACATGCTTCCTGCCATTACCTTTGTCTTGGCCTTCATTCTTAGGCTTGAGAAGGTGAAAATAAGAAGTATACGGAGTCAAGCAAAGGTAGTTGGGACTCTAGCTACTGTAGCAGGTGCCATGGTCATGACACTGATTAAAGGCCCAGAGCTCTTTGGGTTCCACGGAAGCAATGCCCATAACCAGCACAATAATGGGGCAAACCTTCATGATGTCATTAAGGGTTCCATCATGATCACTATTGGCTGCTTTAGTTGGGCTTGTTTCATGGTTCTCCAATCTGTTACCCTAGAAGCTTACCCTGCTGAGCTTTCACTTACATCATGGATATGCCTATTGGGAACAATTCAAGGTGGCATAGTTGGCCTCATTATGGAAAGAGCCAATCCTTCTGTATGGGCTCTTCATTGGGATACAAAACTACTTGCTGCTGCTTATAGCGGCATATTTTGCTCTGGACTGGCTTATTACATCCAAGGAGTAGTGATGAAAACCAGAGGTCCAGTCTTTGTAACAGCATTTAGTCCCCTCTGTATGGTCATTGTTGCCATCATGGGTTCAATTTTTCTTGCTGAGCAAATGTTCCTTGGAAGGGTGGTTGGTGCCATTGTGATTATTCTGGGGCTGTACATGGTGGTGTGGGGTAAAAGCAAAGACTATGACACACCAAATCCAACTATTGAAGACAACAACAGCAAAGCCAAAAATCAGTATCTTAATCCAGAAGGCATGAATGGCAAGGAAAACATAGCTACAGATGAACAAGTATGA 1104 0.4248 MDGHTQKWLERAKPFIGVIFLQFGFAGMDVLSKAALNKGMSNYVLVVYRHVVAFVVITPFALIIDKKVRPKMTFSIFMKMVALSILEPVIDQNLYFLGMKYTTATFAAAMTNMLPAITFVLAFILRLEKVKIRSIRSQAKVVGTLATVAGAMVMTLIKGPELFGFHGSNAHNQHNNGANLHDVIKGSIMITIGCFSWACFMVLQSVTLEAYPAELSLTSWICLLGTIQGGIVGLIMERANPSVWALHWDTKLLAAAYSGIFCSGLAYYIQGVVMKTRGPVFVTAFSPLCMVIVAIMGSIFLAEQMFLGRVVGAIVIILGLYMVVWGKSKDYDTPNPTIEDNNSKAKNQYLNPEGMNGKENIATDEQV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60882g00006 367 PANTHER WAT1-RELATED PROTEIN 13 331 IPR030184 GO:0016020|GO:0022857
Stsc60882g00006 367 MobiDBLite consensus disorder prediction 335 354 - -
Stsc60882g00006 367 Pfam EamA-like transporter family 17 154 IPR000620 GO:0016020
Stsc60882g00006 367 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020
Stsc60882g00006 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Stsc60882g00006 367 MobiDBLite consensus disorder prediction 335 367 - -
Stsc60882g00006 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60882g00006 Stsc-Chr60882 34837 37986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60882g00006 6 367 Nodulin-like Gene Family AT2G37460 64.835 6.88e-173 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60882g00006 - - gmx:100777050 541.576