Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60882g00001 ATGGAGACGCAGCGGATAATGGAGTTTCCGCACAGGAGCATAGACAAGAGGCCAAGGAAGAGACCTCGTTTAACATGGGACATGCCTCCTCCTCCGCCTCCTATTCCTCCTCCTCTTCCTTCCAAGGTTCTTCCAGCTTCAAATCGCAGCCAGGGGGTTGGGAATGGCATTGTTTCAAGTCATGCTTATTCAGCATCCATGTTTTATAGGGGAATGTCTCGCAATGGATCGCCCCCTTGGAGGCCTGATGATAAAGATGGTCACTATGTTTTCGCCGTGGGTGAAAATTTAACACCTCGATACAGGATTCTTGGCAAGATGGGTGAAGGAACATTTGGTCAAGTCTTGGAATGTTTTGACAATGAAAAGAAAGAAGTTGTGGCAATTAAAATTGTTCGCTCCCTAGTCAAGTATCGTGAGGCTGCAATGACTGAAATTGATGTGTTGATGAGGCTAGCCAAACATGATGTTTCTGGTGCTCGTTATGCATGA 492 0.4634 METQRIMEFPHRSIDKRPRKRPRLTWDMPPPPPPIPPPLPSKVLPASNRSQGVGNGIVSSHAYSASMFYRGMSRNGSPPWRPDDKDGHYVFAVGENLTPRYRILGKMGEGTFGQVLECFDNEKKEVVAIKIVRSLVKYREAAMTEIDVLMRLAKHDVSGARYA 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60882g00001 163 Gene3D Phosphorylase Kinase; domain 1 76 163 - -
Stsc60882g00001 163 ProSiteProfiles Protein kinase domain profile. 101 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60882g00001 163 MobiDBLite consensus disorder prediction 25 43 - -
Stsc60882g00001 163 SUPERFAMILY Protein kinase-like (PK-like) 73 155 IPR011009 -
Stsc60882g00001 163 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 159 - -
Stsc60882g00001 163 MobiDBLite consensus disorder prediction 1 51 - -
Stsc60882g00001 163 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60882g00001 Stsc-Chr60882 443 3024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60882g00001 87 157 EF-hand Containing Proteins AT5G22840 36.111 1.54e-06 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Stsc60882g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60882g00001 K08287 - zju:107432833 246.899