Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60878g00004 ATGGGAGCAGCGTCTCTTCCCATAAACAGTGTTAGACTTACAAATTCTACTTCCAACTTCACTTCAACTTCTCACTATGCTTCTCTCTCTTTCTTAAAACTCACTCCTTCTCTCACTGCCTCCAAAACACTCTCTTTGAAGAGTGTTGTTAGAGTGCAAGCTGAGACTGAAGACTATGAATTGAAGCAAATGAGGGACATGGCTGCTGCTAGAAAGAGATGGGAAGCTCTGATAAGAGATGGAAAAGTTAAAGTTCTTACCCCAAGGGAAGCTGGTTATGCAGTTCAGCTTTCGAACAAGCCCCTTCTCGATGTTCGGCCCTCGAACGAGCACAACAAGGCATGGGTGAGAGGTTCAACCTGGATTCCGATATTCGATGTTGACAAAAGACTAGATGCTGGAACCATTCCCAGAAAAGTCACGAATTTCGTTATGGGAGGTTGGTGGAGTGGCTTGCCTACACTATCTTATGATAGCCAGTTCTTAGCCAAAGTTGAGGAGAAGTTCCCCAAAGATGCAGAATTGATTGTTGCATGCCAGAAGGGACTGAGATCATTAGCTGCTTGTGAACTGTTGTACAATGCCGGCTACGGAAACCTTTTCTGGGTTCAAGGAGGCTTAGAGGCTGCTGATGATGAGGATCTCATCGTAGAGGGTCCTATGCCTTTGAAGTTTGCCGGAATCGGTGGCGTTTCAGAATTCCTTGGTTGGACTGATCAGCAAAGAGCGGCTGCAGCGAAAGAAGGTTGGGCTTATAGATTAGTGTTTTCGGCGCGCCTGCTTGGAGTCTTTCTTGCGGCAGACGCGTTATATCTCGGCGCGCAGCAAATTGGTCGCTATATTCAAGATATCAGGAGTCATTAA 864 0.463 MGAASLPINSVRLTNSTSNFTSTSHYASLSFLKLTPSLTASKTLSLKSVVRVQAETEDYELKQMRDMAAARKRWEALIRDGKVKVLTPREAGYAVQLSNKPLLDVRPSNEHNKAWVRGSTWIPIFDVDKRLDAGTIPRKVTNFVMGGWWSGLPTLSYDSQFLAKVEEKFPKDAELIVACQKGLRSLAACELLYNAGYGNLFWVQGGLEAADDEDLIVEGPMPLKFAGIGGVSEFLGWTDQQRAAAAKEGWAYRLVFSARLLGVFLAADALYLGAQQIGRYIQDIRSH 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60878g00004 287 Pfam Rhodanese-like domain 92 209 IPR001763 -
Stsc60878g00004 287 Gene3D - 83 253 IPR036873 -
Stsc60878g00004 287 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 17 286 IPR044664 -
Stsc60878g00004 287 ProSiteProfiles Rhodanese domain profile. 96 218 IPR001763 -
Stsc60878g00004 287 SMART rhod_4 86 216 IPR001763 -
Stsc60878g00004 287 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 74 209 IPR036873 -
Stsc60878g00004 287 CDD RHOD 102 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60878g00004 Stsc-Chr60878 11351 14460 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60878g00004 1 287 Sulfurtransferasese or Rhodanese AT4G24750 66.096 1.29e-142 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60878g00004 - - gmx:100791331 464.536