Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60869g00012 ATGCTTCCCCCTGGTGAATGGCATTGTCCAAATTGCACGTGCAAATTTTGTGGACTAGCCAATGGACCTTTGCATAAAGAAGATGAATCAACTATAAATTCCCTGCATACTTGCAACTTATGTGAGAAAAAATTTCATGACTGTTGTACAAAGGAGATGGATGCCCTTCCTACTAACTCTGATTTCTCAGGGCCTTCCTTTTGCGGAAAGGGCTGCAAAGAGTTCTTTGAGCATTTGAAGAAATACCTTGGTCCCAAGCATGAATTAGATGCAGGGCTCACTTGGTCTCTCATTCGTAGAACAGATGATGACTCAGATGCAGCTAGTAGGGGGATTACCCAGAGGGTGGAATGCAATTCGAAGCTAGCTGTTGCACTCACTGTGATGGATGAATGTTTTTTACCAGTTGTTGATAGGAGGAGTGGGGTCAATATACTACATAATGTTTTATATAATACTGGTTCAAACTTCAGTCGGTTGAATTATACTGGATTTTATACTGTTATTTTGGAGCGAGGGGATGAAATGATTTCTGCTGCATCAATCAGGTACTATGCTTCAGACCTTGCCTTTCATGTTCTGTGA 585 0.4137 MLPPGEWHCPNCTCKFCGLANGPLHKEDESTINSLHTCNLCEKKFHDCCTKEMDALPTNSDFSGPSFCGKGCKEFFEHLKKYLGPKHELDAGLTWSLIRRTDDDSDAASRGITQRVECNSKLAVALTVMDECFLPVVDRRSGVNILHNVLYNTGSNFSRLNYTGFYTVILERGDEMISAASIRYYASDLAFHVL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60869g00012 194 PANTHER PHD FINGER PROTEIN 12 1 190 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60869g00012 Stsc-Chr60869 40134 42036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60869g00012 1 190 PHD Transcription Factor Family AT1G05380 56.842 6.50e-69 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60869g00012 - - mtr:25485216 316.62