Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60869g00011 ATGCCATTCATTGGAACTCGCCATATGTATAGGAATCAGGGGATGTGCCGCCGGCTCTTTCGTGCAATTGAATTGGTTCTTTGCTCTTTGAAGGTTGAGAAACTGGTTATTCCAGCAATTTCTGAACTCATTCATACATGGACAACAGTTTTTGGCTTCACGCATCTTGAGAACTCACTCAGACAAGAAATGAGGTCATTGAGTATGTTGGTTTTCCCTGGTATAGATATGTTGCAGAAGCTGCTAGCGGAGCAAGGAAAACTTGAGGGTGTTGAGAAAATTGAAAATAGAGATGAGGTTAATACTCAGCTCAGTATGGCTAGTAGGTTGGACATGAATTCTTCAACTCTGCAAACTCCTCATGGAACCGATGATGCTAGTTCGAATCCTGACAATGACATAAGCGATGAATCAAGCGATGCTTCTCAAGAACGAAACAACGAAATCTTGGCTGACCGGAATGTGTGA 468 0.4252 MPFIGTRHMYRNQGMCRRLFRAIELVLCSLKVEKLVIPAISELIHTWTTVFGFTHLENSLRQEMRSLSMLVFPGIDMLQKLLAEQGKLEGVEKIENRDEVNTQLSMASRLDMNSSTLQTPHGTDDASSNPDNDISDESSDASQERNNEILADRNV 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60869g00011 155 MobiDBLite consensus disorder prediction 110 155 - -
Stsc60869g00011 155 MobiDBLite consensus disorder prediction 110 136 - -
Stsc60869g00011 155 PANTHER PHD FINGER PROTEIN 12 1 151 IPR042163 GO:0003714|GO:0045892
Stsc60869g00011 155 MobiDBLite consensus disorder prediction 138 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60869g00011 Stsc-Chr60869 38574 39983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60869g00011 1 82 PHD Transcription Factor Family AT1G05380 73.171 2.03e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60869g00011 - - mtr:25485216 219.935