Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60862g00002 | ATGATGACTCGGTTGCAGCAATGGAGGCGCATGGTGGTAGTTTGTGTGTGGTTGTTGAGCATGGAACAGAATCAGTGTTGGAGTCTCATGAACAATGGGTTTGTTGCTGCACATGAAGAACAACTAATCACAACACAAACCATTGGTTCCACATATAATTCATGGCACATTGGACAACATAGGAAGCAACTTCTACAACTACAAGCACCAAAATCTTCAGAGAAACACAAACAAGCAAAGAAAATTACTGCTAACAATAATAAAATCAAAGAGACTATTTCACCATCACCATCATCATATTTTCCCTCTTCATCATTGACACCAAATCCTGAAAGTTTCTCACCACCAAAATCTCCTTCAAATTCACCTTATTCTTCATCACTACCATTATCCCCAGAAGCTTCTGATTCCCCTTCACCATCTCCATCCAATACCTTAATTCTCAATCCTTCACCTTCACCTTCACTGGCAATTCCGGCCAATTCGCCTAGTATCGTTTCGAATTGGATTTCAGCGCCAACGCTGGCTCCTTTGCCTGCAAACAAAGGGGAATCAAAAAGTCATTCAAGGCAACATTCTGTGATTGTTTGGTCAACAGTTGGTGGATTCTCATTCTTGGTTTTGGTGTCAGCAATTGTGTTTGCTTGCTTCAGAAGTAATAAAGTTGAGACTGTGAAACCTTGGGCCACAGGGTTGAGTGGCCAGCTTCAAAAAGCATTTGTAACAGGTGTTCCGAGTCTGAAAAGAGCAGAACTTGAAGTAGCTTGTGAGTATTTCAGCAACATTATTGGTTCTATACCAGATGGGACTGTTTATAAGGGGACACTCTCCAGTGGAGTTGAGATAGCTGTGGCATATTCAGCAGTTACTTCGTCTAAATACTGGTCGAAAAGTATGGAAGCGCAGTACCGAAAGAAGATAGAGGCATTGTCAAGGGTGAACCACAAGAATTTTGTGAATCTTATTGGATATTGTGAAGAGAGAAAGCCATTCACAAGGGTGATGGTTTTCGAGTATGCTCCGAATGGAACATTATTTGAGCATTTGCATGTTAGAGAAGCAGAACAACTAGATTGGGGAATGAGAGTGAGAATAGCTATGGGGATAGCCTATTGTCTAGAACACTTGCACCAACTGACACCGCCCGTCGCCCATAGAGACCTGATCTCTTCCTCTATATACCTGACCGAAGACTACGCGGCCAAATTATCAGACCTTAGTTTCTGGAACAACACAGAAGGTTCTAAAGCCATGCAGCTCTCTGAAACAACTTGGACTAATATAAAGGACAATGTCTATAGCTTTGGAATGATCCTTTTCGAATTGATAACCGGCAGGGTTCCCTATGCTGTGGAGAATGGATTTCGTGTGGATTGGACGGCGGAGTATATAAGGAGGCAGCCCTTGAAAGATATGGTGGATACAAGGCTGAACAATTTGAAAGAAAGTGAAGTTGAGAAATGGTGTCAAGTTATTAACAGCTGTGTTCATCCAAATGCAGAGAAAAGACCAAATATGAGAGAGGTTGTTGCTAAGCTGAAGGAAATAACTGCTATGGAGCTTGATGGAGCAACTCCAAAATCATCTCCACTATGGTGGGCAGAATTAGAAATTATGGATGCAAATTCAGACATTAATCCATGA | 1644 | 0.4179 | MMTRLQQWRRMVVVCVWLLSMEQNQCWSLMNNGFVAAHEEQLITTQTIGSTYNSWHIGQHRKQLLQLQAPKSSEKHKQAKKITANNNKIKETISPSPSSYFPSSSLTPNPESFSPPKSPSNSPYSSSLPLSPEASDSPSPSPSNTLILNPSPSPSLAIPANSPSIVSNWISAPTLAPLPANKGESKSHSRQHSVIVWSTVGGFSFLVLVSAIVFACFRSNKVETVKPWATGLSGQLQKAFVTGVPSLKRAELEVACEYFSNIIGSIPDGTVYKGTLSSGVEIAVAYSAVTSSKYWSKSMEAQYRKKIEALSRVNHKNFVNLIGYCEERKPFTRVMVFEYAPNGTLFEHLHVREAEQLDWGMRVRIAMGIAYCLEHLHQLTPPVAHRDLISSSIYLTEDYAAKLSDLSFWNNTEGSKAMQLSETTWTNIKDNVYSFGMILFELITGRVPYAVENGFRVDWTAEYIRRQPLKDMVDTRLNNLKESEVEKWCQVINSCVHPNAEKRPNMREVVAKLKEITAMELDGATPKSSPLWWAELEIMDANSDINP | 547 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60862g00002 | 547 | MobiDBLite | consensus disorder prediction | 85 | 111 | - | - | |
Stsc60862g00002 | 547 | PANTHER | PROTEIN MALE DISCOVERER 2 | 67 | 540 | - | - | |
Stsc60862g00002 | 547 | Gene3D | Phosphorylase Kinase; domain 1 | 234 | 339 | - | - | |
Stsc60862g00002 | 547 | ProSiteProfiles | Protein kinase domain profile. | 257 | 516 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc60862g00002 | 547 | MobiDBLite | consensus disorder prediction | 118 | 150 | - | - | |
Stsc60862g00002 | 547 | FunFam | Inactive receptor-like serine/threonine-protein kinase | 231 | 339 | - | - | |
Stsc60862g00002 | 547 | SUPERFAMILY | Protein kinase-like (PK-like) | 244 | 513 | IPR011009 | - | |
Stsc60862g00002 | 547 | Pfam | Protein tyrosine and serine/threonine kinase | 261 | 513 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc60862g00002 | 547 | Gene3D | Transferase(Phosphotransferase) domain 1 | 340 | 525 | - | - | |
Stsc60862g00002 | 547 | MobiDBLite | consensus disorder prediction | 69 | 150 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60862g00002 | Stsc-Chr60862 | 12855 | 16233 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60862g00002 | 237 | 516 | Receptor kinase-like Gene Family | AT4G31110 | 33.762 | 5.24e-41 | 156 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-2 | Stsc60862g00002 | PK_Tyr_Ser-Thr | 1.3e-24 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60862g00002 | - | - | gmx:100801161 | 611.683 |