Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60862g00002 ATGATGACTCGGTTGCAGCAATGGAGGCGCATGGTGGTAGTTTGTGTGTGGTTGTTGAGCATGGAACAGAATCAGTGTTGGAGTCTCATGAACAATGGGTTTGTTGCTGCACATGAAGAACAACTAATCACAACACAAACCATTGGTTCCACATATAATTCATGGCACATTGGACAACATAGGAAGCAACTTCTACAACTACAAGCACCAAAATCTTCAGAGAAACACAAACAAGCAAAGAAAATTACTGCTAACAATAATAAAATCAAAGAGACTATTTCACCATCACCATCATCATATTTTCCCTCTTCATCATTGACACCAAATCCTGAAAGTTTCTCACCACCAAAATCTCCTTCAAATTCACCTTATTCTTCATCACTACCATTATCCCCAGAAGCTTCTGATTCCCCTTCACCATCTCCATCCAATACCTTAATTCTCAATCCTTCACCTTCACCTTCACTGGCAATTCCGGCCAATTCGCCTAGTATCGTTTCGAATTGGATTTCAGCGCCAACGCTGGCTCCTTTGCCTGCAAACAAAGGGGAATCAAAAAGTCATTCAAGGCAACATTCTGTGATTGTTTGGTCAACAGTTGGTGGATTCTCATTCTTGGTTTTGGTGTCAGCAATTGTGTTTGCTTGCTTCAGAAGTAATAAAGTTGAGACTGTGAAACCTTGGGCCACAGGGTTGAGTGGCCAGCTTCAAAAAGCATTTGTAACAGGTGTTCCGAGTCTGAAAAGAGCAGAACTTGAAGTAGCTTGTGAGTATTTCAGCAACATTATTGGTTCTATACCAGATGGGACTGTTTATAAGGGGACACTCTCCAGTGGAGTTGAGATAGCTGTGGCATATTCAGCAGTTACTTCGTCTAAATACTGGTCGAAAAGTATGGAAGCGCAGTACCGAAAGAAGATAGAGGCATTGTCAAGGGTGAACCACAAGAATTTTGTGAATCTTATTGGATATTGTGAAGAGAGAAAGCCATTCACAAGGGTGATGGTTTTCGAGTATGCTCCGAATGGAACATTATTTGAGCATTTGCATGTTAGAGAAGCAGAACAACTAGATTGGGGAATGAGAGTGAGAATAGCTATGGGGATAGCCTATTGTCTAGAACACTTGCACCAACTGACACCGCCCGTCGCCCATAGAGACCTGATCTCTTCCTCTATATACCTGACCGAAGACTACGCGGCCAAATTATCAGACCTTAGTTTCTGGAACAACACAGAAGGTTCTAAAGCCATGCAGCTCTCTGAAACAACTTGGACTAATATAAAGGACAATGTCTATAGCTTTGGAATGATCCTTTTCGAATTGATAACCGGCAGGGTTCCCTATGCTGTGGAGAATGGATTTCGTGTGGATTGGACGGCGGAGTATATAAGGAGGCAGCCCTTGAAAGATATGGTGGATACAAGGCTGAACAATTTGAAAGAAAGTGAAGTTGAGAAATGGTGTCAAGTTATTAACAGCTGTGTTCATCCAAATGCAGAGAAAAGACCAAATATGAGAGAGGTTGTTGCTAAGCTGAAGGAAATAACTGCTATGGAGCTTGATGGAGCAACTCCAAAATCATCTCCACTATGGTGGGCAGAATTAGAAATTATGGATGCAAATTCAGACATTAATCCATGA 1644 0.4179 MMTRLQQWRRMVVVCVWLLSMEQNQCWSLMNNGFVAAHEEQLITTQTIGSTYNSWHIGQHRKQLLQLQAPKSSEKHKQAKKITANNNKIKETISPSPSSYFPSSSLTPNPESFSPPKSPSNSPYSSSLPLSPEASDSPSPSPSNTLILNPSPSPSLAIPANSPSIVSNWISAPTLAPLPANKGESKSHSRQHSVIVWSTVGGFSFLVLVSAIVFACFRSNKVETVKPWATGLSGQLQKAFVTGVPSLKRAELEVACEYFSNIIGSIPDGTVYKGTLSSGVEIAVAYSAVTSSKYWSKSMEAQYRKKIEALSRVNHKNFVNLIGYCEERKPFTRVMVFEYAPNGTLFEHLHVREAEQLDWGMRVRIAMGIAYCLEHLHQLTPPVAHRDLISSSIYLTEDYAAKLSDLSFWNNTEGSKAMQLSETTWTNIKDNVYSFGMILFELITGRVPYAVENGFRVDWTAEYIRRQPLKDMVDTRLNNLKESEVEKWCQVINSCVHPNAEKRPNMREVVAKLKEITAMELDGATPKSSPLWWAELEIMDANSDINP 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60862g00002 547 MobiDBLite consensus disorder prediction 85 111 - -
Stsc60862g00002 547 PANTHER PROTEIN MALE DISCOVERER 2 67 540 - -
Stsc60862g00002 547 Gene3D Phosphorylase Kinase; domain 1 234 339 - -
Stsc60862g00002 547 ProSiteProfiles Protein kinase domain profile. 257 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60862g00002 547 MobiDBLite consensus disorder prediction 118 150 - -
Stsc60862g00002 547 FunFam Inactive receptor-like serine/threonine-protein kinase 231 339 - -
Stsc60862g00002 547 SUPERFAMILY Protein kinase-like (PK-like) 244 513 IPR011009 -
Stsc60862g00002 547 Pfam Protein tyrosine and serine/threonine kinase 261 513 IPR001245 GO:0004672|GO:0006468
Stsc60862g00002 547 Gene3D Transferase(Phosphotransferase) domain 1 340 525 - -
Stsc60862g00002 547 MobiDBLite consensus disorder prediction 69 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60862g00002 Stsc-Chr60862 12855 16233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60862g00002 237 516 Receptor kinase-like Gene Family AT4G31110 33.762 5.24e-41 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Stsc60862g00002 PK_Tyr_Ser-Thr 1.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60862g00002 - - gmx:100801161 611.683