Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60862g00001 ATGGACATGGATCCTCACATCAGAACCTTCCCTGACATTGGTCAACGTGCTTTTGGTGATAAAGGCAGACTAATGGTCTCCATTGCTATGAATTCAGAGCTTTACCTTGTTGTAACAGGTTACCTGATCTTGGAAGGTGACAACCTTAACAAGCTAATCCCAAATGTTGAAGTGAACCTTGGAGGGTATGTAATTGGTGGAACAACAATATTTGCAATACTAGCAGCAATTGTGATCTTGCCAACAGTGTTGTTGCAAGATCTTAGCCTGTTGTCTTACGTGTCAGCTAGTGGGGCTTTGGCTTCCACAGTGTTCTTGCTCTCTCTGTTGTGGAATGGAACCATTGATGGAACAGGGTTTCAAGGAAAGGGTACAGTTTTCAGGTGGAGCGGCATCCCTGCTGCAGTTAGTTTGTATGCATTTTGCTACAGTGCTCATCCTGTTCTTCCCACCCTCTACAATGCCATGAGGAACAAGAATCAGTTCTCAACTGTTCTATTTGTGTGCTTTCTAGTGTGCACTCTTGGTTATGCTGCAGCAGCAATCTTAGGGTACCTAATGTTTGGAGATGAAGTTGAATCACAAGTTACACTGAACCTTCCAACAGGGAAATTCAGCTCACAAGTTGCAATATACACAACCTTGGTGAACCCAATAGCCAAATATGCATTGATGCTAACCCCAATTGTGAATGCAGTGAAGAACAAGATCTCATGCAATTACAGAAAGAAGAGGCTCACACATGTCATTGTTAGTACCTCATTGCTCATTAGCACTCTTATTGTGGCTGTGGCAATTCCCTTATTTGGGTACCTAATGTCACTTGTTGGAGCTTTGCTAAGTGTCTCAGCATCAATTCTTGTCCCATCAGTGTGTTACTTGAAGATCTCTGGAGCTTACAAGAGATTTGGCTCAGAAATGATCATAAACTATTCAATTATAGTCATGGGGGTTGCTATTGCTGTTGTAGGTACTTACACTTCTCTTGTAGATATTGTTCACAATTTGTGA 1011 0.4204 MDMDPHIRTFPDIGQRAFGDKGRLMVSIAMNSELYLVVTGYLILEGDNLNKLIPNVEVNLGGYVIGGTTIFAILAAIVILPTVLLQDLSLLSYVSASGALASTVFLLSLLWNGTIDGTGFQGKGTVFRWSGIPAAVSLYAFCYSAHPVLPTLYNAMRNKNQFSTVLFVCFLVCTLGYAAAAILGYLMFGDEVESQVTLNLPTGKFSSQVAIYTTLVNPIAKYALMLTPIVNAVKNKISCNYRKKRLTHVIVSTSLLISTLIVAVAIPLFGYLMSLVGALLSVSASILVPSVCYLKISGAYKRFGSEMIINYSIIVMGVAIAVVGTYTSLVDIVHNL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60862g00001 336 PANTHER OS05G0424000 PROTEIN-RELATED 8 322 - -
Stsc60862g00001 336 Pfam Transmembrane amino acid transporter protein 4 328 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60862g00001 Stsc-Chr60862 1525 3923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60862g00001 1 333 Amino Acid or Auxin Permease AAAP Family AT3G28960 55.556 2.29e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60862g00001 K15015 - gmx:100784690 526.554