Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60858g00007 ATGAGTTTAGGTGCTGCCAAGGAAGAATCTGCACCAGAGGTTCATGTCCCAGCTGATATTGATTGGCATAAGCTCGATAAATCAAAGTTCTTCTTCCTTGGAGCAGCACTCTTCTCTGGTGTTTCAGCAGCACTATACCCTGTTGTGGTGTTGAAAACGAGGCAGCAAGTTTCTCAGTCCCAAGTTCCTTGCATCAAGACTGCATTTTCAGTGATTAGCCATGAGGGTTTTCGAGCATTGTATAGAGGGTTTGGTACCTCTTTGATGGGGACAATCCCTGCTAGAGCCATGTACATGGCTGCTTTAGAAATCACCAAGAGTAATGTAGGCACTGCCACTGTTAGGTTTGGGATAGCCGAGCCGACTGCGGCCACCATCGCGAATGCGGTGGCCGGATTGAGTGCAGCGATGGCGGCTCAGATTGTGTGGACCCCGGTGGACGTAGTGAGCCAGAGGCTGATGGTTCAAGGTGGCTCCAATGGTAGGCAATATGCCAATGGGATTGATGCATTCAGGAAGATTCTGAGAACAGATGGTCCAAGAGGGTTGTACAGAGGTTTTGGGATATCTATTTTGACATATGCACCTTCAAATGCTGTTTGGTGGGCTTCATATTCTGTTGCACAGAGAATGGTCTGGGGTGGAGTTGGATACTACTTGTGCAGCAGCAATAAGAAGGATGATGGCAGCGAAACGACGAACGAGCTGAGGCCGGATTCGAAGACAGTAATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCTGGTGGCATGTCTGCATTAATCACCATGCCATTGGATACAATTAAGACAAGGCTGCAGGTATTGGATGGTGATGAGAATGGGAATGGGAGGAGAGGACCAACGGTTGTTCAGACAGTGAGGAATTTGGTTAAGGAAGGTGGTTGGATGGCATGTTACAGAGGTTTGGGACCAAGATGGGCTTCAATGTCATTGTCTGCAACAACAATGATCACTACTTATGAGTTCCTAAAAAGACTTTCCACAAAGAATCAGGATGTTTTGACATGA 1029 0.4762 MSLGAAKEESAPEVHVPADIDWHKLDKSKFFFLGAALFSGVSAALYPVVVLKTRQQVSQSQVPCIKTAFSVISHEGFRALYRGFGTSLMGTIPARAMYMAALEITKSNVGTATVRFGIAEPTAATIANAVAGLSAAMAAQIVWTPVDVVSQRLMVQGGSNGRQYANGIDAFRKILRTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLCSSNKKDDGSETTNELRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGNGRRGPTVVQTVRNLVKEGGWMACYRGLGPRWASMSLSATTMITTYEFLKRLSTKNQDVLT 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60858g00007 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 242 333 IPR018108 -
Stsc60858g00007 342 SUPERFAMILY Mitochondrial carrier 24 330 IPR023395 -
Stsc60858g00007 342 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 338 - -
Stsc60858g00007 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 211 IPR018108 -
Stsc60858g00007 342 Gene3D Mitochondrial carrier domain 30 340 IPR023395 -
Stsc60858g00007 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Stsc60858g00007 342 Pfam Mitochondrial carrier protein 125 212 IPR018108 -
Stsc60858g00007 342 Pfam Mitochondrial carrier protein 245 337 IPR018108 -
Stsc60858g00007 342 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60858g00007 Stsc-Chr60858 26895 29060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60858g00007 1 339 Chloroplast and Mitochondria Gene Families AT1G72820 74.203 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60858g00007 K15121 - qsa:O6P43_027580 543.888