Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60858g00003 ATGCATGACTTAATTCGAGAAATGGGCCGCGAAATTGTCCGCGAAGAATCTCCAAAGGATCCAGGAAAACGCAGTAGACTGTGGGATGCTCGTGATATCTATGAAGTATTGAAAAACAATAAGGGAAGTGAAGTTATTGAAAGTATCACATTAAACATGGCGGAAATTGAGAGCATAAGCTTGCAGCCTGGGATATTTGAAAGAATGAGAGCACTGAAGCTTTTCAGATGTCATACACCCGAATCCAAAAACAAGTTGCTTGCTCCTCAAGGTATTACATCCATGTCAAACGAGTTCAGGTATTTCCGTTGGGATGAGTATCCTTTGAAATCTTTGCCTCCTTCTTTTGGTGTTGAGAAAATTGTTGAAATCATAATGCCCAACAGTGGAGTGCAAAGGCTTTGGGAAGGTGCACAGAATCTTGTAAATCTAAGGAAAGTGAATCTTGATGGTTCATCAAGCCTAACGGAACTCCCAGATTTATCAAAAGCGTCAAATGTTAGAGAAGTGAGTATCTCAGGTTGCAAGAGTCTGTGCCAAATTCCTCCATCTGCTGTATCATCACAGAAGCTGAAATATCTCAATGTGAGCAACTGTGAGAGCCTTCAGTCCATAGAAGAGCTTCCACCATCGGTTGTATGCGTAATTGCTAGCAACTGCGGCTCACTACACACTGTATCTATATCTGCTTCCAATTCTGTAGCCGAAGAAGGGACAATCCAGCAGCAGCAATTTGAGGATATAACCTTCAATTTCAGCGAGTGCCTCAAATTGGGAGGGAATGCAAGAAAGAGCATTATGGAACATGCCTATGGCAGACTAAAGCTACCACTAGCAGCAGCACCTACATGTGCTACAACAGCATGGCAGGAAGATAAAGATAAGTATCTTTCTAGGTGGAACGACCACAGGCACAATCATCCCAAGTTAAATGTCTTGTCACTTGGAGTCCCAGAATGGTTCAAATATGTAAATCCACAAAGCAGGGCCGTCACTATTGATGTTGCCCCAGGTGATTGCTTGTTGGGTTTCATCTTTTGGGTGGTTTTTCCTGCATACTATGGGAGTTATGAAGTGGATGCCACTTCAGTGACATATGACTATTGCGTTGAAGTGAGTGATGGCCCAAGTTTCAGTTATCACGGTTATTATAGTCCAAGAGAGAGAATATGGAATAGCAAAAGCTATGTTTGGTACGACGGGCAATGCTGTACTGACATGATGAAAGTAACAATGGAAGAAAACAGCAACACTAGTAATAATAACAGCATTCAGCTGGTGGTTTCATTCAAGTTCTTGTACAATCGTCTTATTTTGAGTCAGCCTATTGAGGAAGATGATGACAAAGAAGTAGAACAATGGGGTGTACACCCGGTATATGCCTCAGATGTTCGAAATGATGACAAGCTTCCAGTAAACCCCTGCGTTTCTCAACTAATCTATGGCGACATCATAATGATACCATATGACAATCATGCGATTATGACTATGGGTCAATTCTAA 1503 0.4185 MHDLIREMGREIVREESPKDPGKRSRLWDARDIYEVLKNNKGSEVIESITLNMAEIESISLQPGIFERMRALKLFRCHTPESKNKLLAPQGITSMSNEFRYFRWDEYPLKSLPPSFGVEKIVEIIMPNSGVQRLWEGAQNLVNLRKVNLDGSSSLTELPDLSKASNVREVSISGCKSLCQIPPSAVSSQKLKYLNVSNCESLQSIEELPPSVVCVIASNCGSLHTVSISASNSVAEEGTIQQQQFEDITFNFSECLKLGGNARKSIMEHAYGRLKLPLAAAPTCATTAWQEDKDKYLSRWNDHRHNHPKLNVLSLGVPEWFKYVNPQSRAVTIDVAPGDCLLGFIFWVVFPAYYGSYEVDATSVTYDYCVEVSDGPSFSYHGYYSPRERIWNSKSYVWYDGQCCTDMMKVTMEENSNTSNNNSIQLVVSFKFLYNRLILSQPIEEDDDKEVEQWGVHPVYASDVRNDDKLPVNPCVSQLIYGDIIMIPYDNHAIMTMGQF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60858g00003 500 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 226 IPR044974 GO:0006952
Stsc60858g00003 500 SUPERFAMILY L domain-like 1 236 - -
Stsc60858g00003 500 Gene3D Ribonuclease Inhibitor 28 271 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60858g00003 Stsc-Chr60858 5694 11780 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60858g00003 1 266 WRKY Transcription Factor Family AT4G12020 34.420 2.46e-37 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60858g00003 - - ahf:112706556 694.501