Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60856g00004 ATGGTTCTCCAAAAATCATCTTCATCACCATCTATGGTGTTTAAAGTGAGGAGGAATCCAACAGAGCTAGTGGCACCTGCTGGACCCACTCCCCATGAGCTTAAGCTTCTCTCCGACATTGATGACCAACAAGGTCTACGCATCTACTATTCAGCGGTTCAGTTCTTTCCTTACAGCTCTTCAATGGCAGGGAAAGACCCTATCCCTGTTATTAGGCAAGCATTATCCAAAGTACTTGTGTTGTATTATCCATTAGCTGGGAGGCTTAGGAAAGGTCCTAGTGGCAAACTTATGGTGGATTGCACTGCCGAAGGTGTATTGTTCATCGAAGCTGATGCAGATGTTACACTTGACCACTTTGGTGTTGATCTTCTGCCTCCATTCCCTTGCTTTGATGAGCTCCTCCACCATGTTCCATCTTCAAATGACGGAATTATTAACTCTCCGCTCCTCCTTATTCAGGTGACACGACTGAAATGCGGCGGGTTTATCTTTGCTATCCGTGTGAACCACACAATGTGTGATGCGATTGGAATTACTCAGTTCATAAAGGCCGTTGCAGAAATAGCCCAAGGTGCGTCAAAGCCTTCTATCATGCCAGTGTGGTGTAGGGACCTTCTTTGTGCCAGGGATCCACCGACAGTTACATCCCTCCACCCTGAATATCACCAACCACCTCTTCATCATCACAACAAAAATGTCTTCTCATCCAAATCATGCCACGCTTCCTTCTTCTTTGGCCCCAAACAGATCCATGCATTGCGCCGCCTCCTCCCTGGTGACCTTGCTCAATCTTCCTCCACCTTCGAGGTTCTCACTGCATTCCTCTGGCGTTGTTATACTGCTACACTCCATTATCAAAACCCTAATCAAGAGGTTCGCTTGATGTGCGTAGTCAATATCAGATCTACGTTTAATCATCCACTACCTGAAGGCTATTATGGCAACGCTTTTGTGATTCCTGCGATAGTCTCCACTGTGGAGATGCTGTGCAATCGTCCCTTGAGCTATGCGTTGAAGTTAGCAAAGAAATCAAAGAAGGCAGCTACTGAGGAGTATTTCCACTCTACTGCCGATCTAATGGCAACTAATGGAAGGCCTGCCTTTAACATGACAGAATCCTTTATAGTTTCAGACCTCACAAAATGTGGGTTAAGTGATGTGGATTATGGTGGATGGGGTAACCCTTTGTATTCGGGACTAGATGGTCTGGATGATGTTCCTGGTGCCTGCTACTATGTTCCATATACTAACTCTAAAAGAGAGAATGGTAAAGAGGTCTTAATTTGCCTCCCAGGTGAAGCCATGAAAAGAGACTTTCTTTGTGCGAGGGACCCACCAAGAGTTACATGCCTCCACCCTGAATATCACCAACCACCACTTCATGATAACAAAAACTTCTCATCAAAATCATGCGATGCTTCCTTCTTCTTTGGCCCCAAACACATTGATACATTGCGCAGGCTCCTCCGTTCTCACCATGCTCAATCTTCATCCACCTTTGATATCCTCACTGCATTTCTCTTGCATTGTCATACAGCTGCCCTGCATTCGCAAAACCCTAATCATCAAGAGGCGTTGGAGTTGGCAAAGAAACAAAAGAAAGAAGCTACCGAGGAGTATGATGTGCGCTCTACTACCGATCTAATGGCGACGAAGGGAAGGCCTGGCATTTCGTTGAGAACATCCTTTATAGTTTCAAACGTTTCAAAATTAGGGCTAAGTGAGGTGGATTATGGATGGGGTAAGCCTTTGTATATTGGACCAGACAAGGTTGGTATACATGATATTCCTAGTCTGTGCTACTATCTTCCATATACTAATTCTAAAGGAGAGCATGGTATAGTGGTTTTAATTTGCCTCCCTGAAGACGCCATGAAGAGGTTTGAAAACGTGCTTAATGGAATACTTCACATCGAGGGTAGTGAAGATAATAAACCTATCAACTCAATTATGTCCAATCTGTAA 1968 0.4466 MVLQKSSSSPSMVFKVRRNPTELVAPAGPTPHELKLLSDIDDQQGLRIYYSAVQFFPYSSSMAGKDPIPVIRQALSKVLVLYYPLAGRLRKGPSGKLMVDCTAEGVLFIEADADVTLDHFGVDLLPPFPCFDELLHHVPSSNDGIINSPLLLIQVTRLKCGGFIFAIRVNHTMCDAIGITQFIKAVAEIAQGASKPSIMPVWCRDLLCARDPPTVTSLHPEYHQPPLHHHNKNVFSSKSCHASFFFGPKQIHALRRLLPGDLAQSSSTFEVLTAFLWRCYTATLHYQNPNQEVRLMCVVNIRSTFNHPLPEGYYGNAFVIPAIVSTVEMLCNRPLSYALKLAKKSKKAATEEYFHSTADLMATNGRPAFNMTESFIVSDLTKCGLSDVDYGGWGNPLYSGLDGLDDVPGACYYVPYTNSKRENGKEVLICLPGEAMKRDFLCARDPPRVTCLHPEYHQPPLHDNKNFSSKSCDASFFFGPKHIDTLRRLLRSHHAQSSSTFDILTAFLLHCHTAALHSQNPNHQEALELAKKQKKEATEEYDVRSTTDLMATKGRPGISLRTSFIVSNVSKLGLSEVDYGWGKPLYIGPDKVGIHDIPSLCYYLPYTNSKGEHGIVVLICLPEDAMKRFENVLNGILHIEGSEDNKPINSIMSNL 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60856g00004 655 PANTHER ACYL TRANSFERASE 4 525 633 - -
Stsc60856g00004 655 Pfam Transferase family 532 631 - -
Stsc60856g00004 655 Pfam Transferase family 15 437 - -
Stsc60856g00004 655 Gene3D - 11 223 IPR023213 -
Stsc60856g00004 655 Gene3D - 520 634 IPR023213 -
Stsc60856g00004 655 Coils Coil 520 540 - -
Stsc60856g00004 655 Gene3D - 224 439 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60856g00004 Stsc-Chr60856 19698 23706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60856g00004 15 437 Monolignol Biosynthesis Gene Families AT5G48930 28.506 9.77e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60856g00004 K19861 K13610 gmx:100795237 541.962