Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60850g00006 ATGGATATCCAGAATCAAACACCAACCCCTGACACTGAGGAACACAACAACTACTCTTCTCTTTCTAATTTGCTTCAACAATTCACAAACATTCCCACCATTGACAAGGCTTGGCTTTTCAACTCTCATTCTCAAACCACCTTGCAGGGAATGTTCTCTATTACTCAACCTGACCTTGTAACAAACAACACCAGCAAACTCATACTATCATGCCAAATCGTTAAAGAAACTCACAATTCTGTTAATTTTCTATGGGCTCCATTTCCAATTGAGGTTTCTGCTGTCTCCTTGATTGTTCCATCACCTTCTGGATCTAAACTATTGCTAATCCGGAATCCCCATGATGGCAAATCGCCTTCTCGCTTTGAAATTTGGAGTCCTTCTGGAATGGAGAAGGATTTCCACATTCCCCAATCTCTGCATGGCTCAGTCTACAATGATAGATGGTTTGAGGGAGTCTCTTGGAACTTGGATGAGACATTTGTAGCCTATGTAGCAGAAGAACCCTCTCTTTCGAAGCCGGAATTTAGCGACATAGACTACAAGAAAGGCGGTGGTTCTGCGACCGTGGACAAGAATTGTGGTACATGGAAAGGCCAAGGGGACTTGGAGGAAGATTGGGGAGAAACATATGCTGGAAAGAGAAGGCCTGCACCTTTTGTTATAAATGTCAACAGTGGAGAGGTACAAGCTGTTAAAGGAATTGAAAGATCTTTGAGTGTTGGCCAAGTTGTGTGGGCACCATTGCGCAACGGCTCGGAACAATATCTTGTTTTTGTTGGGTGGTTAGTTGAGAAAAGAAAGCTTGGTATGAAGTACTGCTCTAACAGGCCTTGTGCATTATATGCAGTTAGAGCACCCAATCATGACCCAAAATCTGATGAACAAGAGATCAACTCAATTCAAGAATGGCATATACTGAACCTTACCGGAACCATAAGCAGTGCCCTCTTTCCAAGATTCAGCCCAGATGGAAAGTTCCTTGTGTTTTTATCTGCAAAAAGTGCTGTGGATTCAGGAGTGCACAATGCTACAAACTCGCTACACAGAATCGATTGGCCAACTGATGGAAAACTGCACCAATCTGCCAAAATTTATGACATTCTTCCAGTTGTGACAAGCGCTGAGGAAGGTTGCTTCCCGGGGCTTTATTGTACAACTATCCATAATAATCCTTGGCTACCTGACAACTCTACTATGATCATATCATCTATCTGGCACAGCAGTGAAGTTCTACTCTCTGTGAATGTGTTGAGTGGGGAAGTTGCACATATCAGCCCAGCAGACCCTACTTTCTCTTGGAACCTTCTTATGCTGGATGGGAACAACATTGTCGCCATTTGCAGCAGCCCAGTTGATGTTCCTCAAATCAAGTACGGAACGTTTATCCAGAAATCAAAGGATAGTATTCCATGGAGTTGGTCAGATATAAGCAGTCCTATATTCAGATGTTCCGACAAGGTTAGGCCTTTGCTGTCTTCTCTCGAGTGCAGTATACTGAAAATCCCGGTCAAGGAGGCCTGTGATGGCATAGCAAAGGGTGCTAGTAATCCTTTTGAAGCCATATTTGTGTCATCTAAATCCAAGAAAAAGGATCCACTAATTGTGATCCTTCATGGAGGGCCACATGATGTTTCTTTGTCACACTTTTCAAAGTCTTGGGCGTTTCTATCTTCACTTGGATACAGCTTGCTGATTGTAAACTACAGAGGTTCATTAGGATTTGGGGAGGAAGCATTACAATCTCTTCCAGGAAAAGTTGGGAGTCAGGATGTGAATGATGTTTTGTCTGCAATAGACGATGTGATCAAGTTGGGAGTTGCAAGTCCATCCAAGATAACAGTGATGGGAATATCACATGGCGGCTTCTTGACAACCCACCTGATCGGCCAGGCACCGGACAAGTTTGCGGCTGCAGCCGCCATCAATCCTGTTTGCAACCTTGCACTCATGGTTGGCACAACTGACATCCCTGATTGGTGCTATGTAGAGGCTTTTGGAACCAATGCCAAACATAGCTTCCAACAACCACCTTTTCCACAACATTTGACTCACTTTTACAACAAGTCTCCTATTTCACACCTCTCTAAGGTAAAAGCACCAACGCTTTTCTTATTAGGTGCTCAAGATGTACGTGTTCCAATTTATGATGGATTGCAGTATGCTCGGGCTCTAAAGGAGAAAGGAGTCGACGTCAAAACCATTATGTTCCCAAACGATGTCCATGGACTCCAAAGACCACAATCTGAGTTTGAATGCTTCCTTAACATTGCAATGTGGTTCAACAAGTACTGCAAATAA 2301 0.4346 MDIQNQTPTPDTEEHNNYSSLSNLLQQFTNIPTIDKAWLFNSHSQTTLQGMFSITQPDLVTNNTSKLILSCQIVKETHNSVNFLWAPFPIEVSAVSLIVPSPSGSKLLLIRNPHDGKSPSRFEIWSPSGMEKDFHIPQSLHGSVYNDRWFEGVSWNLDETFVAYVAEEPSLSKPEFSDIDYKKGGGSATVDKNCGTWKGQGDLEEDWGETYAGKRRPAPFVINVNSGEVQAVKGIERSLSVGQVVWAPLRNGSEQYLVFVGWLVEKRKLGMKYCSNRPCALYAVRAPNHDPKSDEQEINSIQEWHILNLTGTISSALFPRFSPDGKFLVFLSAKSAVDSGVHNATNSLHRIDWPTDGKLHQSAKIYDILPVVTSAEEGCFPGLYCTTIHNNPWLPDNSTMIISSIWHSSEVLLSVNVLSGEVAHISPADPTFSWNLLMLDGNNIVAICSSPVDVPQIKYGTFIQKSKDSIPWSWSDISSPIFRCSDKVRPLLSSLECSILKIPVKEACDGIAKGASNPFEAIFVSSKSKKKDPLIVILHGGPHDVSLSHFSKSWAFLSSLGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLSAIDDVIKLGVASPSKITVMGISHGGFLTTHLIGQAPDKFAAAAAINPVCNLALMVGTTDIPDWCYVEAFGTNAKHSFQQPPFPQHLTHFYNKSPISHLSKVKAPTLFLLGAQDVRVPIYDGLQYARALKEKGVDVKTIMFPNDVHGLQRPQSEFECFLNIAMWFNKYCK 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60850g00006 766 Gene3D alpha/beta hydrolase 517 764 IPR029058 -
Stsc60850g00006 766 FunFam Acylamino-acid-releasing enzyme 508 765 - -
Stsc60850g00006 766 SUPERFAMILY DPP6 N-terminal domain-like 89 452 - -
Stsc60850g00006 766 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 15 289 IPR045550 -
Stsc60850g00006 766 Pfam Prolyl oligopeptidase family 549 765 IPR001375 GO:0006508|GO:0008236
Stsc60850g00006 766 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 14 765 - -
Stsc60850g00006 766 ProSitePatterns Prolyl endopeptidase family serine active site. 594 624 IPR002471 GO:0004252|GO:0006508
Stsc60850g00006 766 SUPERFAMILY alpha/beta-Hydrolases 527 765 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60850g00006 Stsc-Chr60850 20464 25139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60850g00006 529 749 Carbohydrate Esterase AT5G36210 25.792 5.67e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60850g00006 K01303 - gmx:100812681 1149.81