Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60847g00003 ATGGCAGAAAAACTTTATGGTGGAGCTTACCTCTCTTCCTTTGTTGGAGCTGTTTTAGACAACCTGTCTAAAATAATTGAAGATGATTCTGTCCTCAATGGAAACTACTCTTCTTTGGAGTGGATTCAAAGGTTGGAGAAATGTCTATATGATGTTGGACCTGTTCTTGATGATGCTGAACTGAAACAGTTCACTGACAAGAGAGTCAAGAAGTGGCTTGCTGATCTCCAAGATGCTCTCTATTCTGCTGATGACTTCCTCGATCAACTCTCCACTAAAGCTGCCACTGCCAATCCGACCGCCACTCAAACGGATCCAGGTATCTCTGCTTCTTGTTCTCGTGTTGTTGATTCATATATTGAAGATACTCGTGACATGGAAAGAATAGTTGGAAGAGTAGAGTTTCTTGTAGCACGAAAAAGTTATCTTCGTTTGAAGGAGACTGCCAAGGTGGACATGTCATGGAGAATTCCATCTACATCTCTGGTTGAACCATCGAAGATATGTGGCAGGGAAGAAGACAAGGACGCCATTTTGAAGCTGTTGTTGAATGATGATGATACTGTCGATGGTGATATACCTGTGATTCCCATTGTTGGCATGGGTGGGATAGGAAAGACCACTTTGGCTCAAATGGTTTACCACGATGACAAAGTGAAGGAGATGTTTGCTTTTCGAGGTTGGGTTTGTGTCTCTGAAGAGTTTGATGTTGTCAAGGTCACCAAGACTATAATCGAGGCAATAACTTCGAGTCCTTGTAACTTGACAGACTTGAATTTACTTCAACATGATTTGAAGGAAAAGTTGTCCAGGAAAAAGTTCTTTGTTGTCTTGGACGATGTTTGGAATGAAAATTATGATGATTGGAATGTGCTTCTAAAACCTTTTCAGAAAGGGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAGTAAAAAGGTGGCTTCTGTGGTGGAAACTGTTTCACCTCATGAACTGAGGTCATTGTCTGATGAAGATTGTTGGCTGGTGTTTTCAAAACATGCACGTCTTTCACCTGCTTCTATGGAGAATCCAACCCTCGTAGAAGTGGGCAAAGATATCATAAAGAAGTGCGATGGATTGCCCTTGGCAGCTCAAGCACTTGGAGGTCTATTGCGTGGAAATTCTGATGTCAAGTACTGGAATCATTTGCTGAAGAGTGAGATATGGGGACACTCCGATGATGGAATAAAGGGAATTAATGACTATCCATTTAGCAAAGATGAATTGATATTGCTATGGATGGCAGAGAATTTTTTGCAACCAGTTGGAAAAAAGACTATGGAAGAAGTTGGGGATGGATATTTTGATGAATTAATTGCGAGATCATTTTTCCAACCTCAAAGTACTCGCCATAAGATCTTTGTGATGCATGATCTTGTGCACGATTTGGCAATGAGCTTTGCTGGAGAATTCTATTATCGAGGTGAAGATCTTGGGAAGGCTGATGAGATTGATAGTAAAACTCGTCATTTGTCACATAATGCCAAAGGCAATTATCCAATGTCAAAACTTTTGGGAGTTTGTGACGGAGTGGAAAATACAAGGACATTTCTTGAAATCAATTTGGATCGGTGGATTCCATTCAATATGGAAAACGCACCATGTATCTTGTTGTCAAAGTTGCTGCACCTTAGGGCTTTGTCGTTCAAATCCTTTCCTCTTGAGTCACTGCCGGATTCAATAGGTGGGTTGATTCATCTGCGCTACTTGGATTTGTCTGAGACCTACATCGTGACATTGCCAGAGTCATTGTGTAAGCTGTACAATTTGCAAACCTTGAAGCTGTTTGAATGCCAGAAACTAAAAAAGCTTCCAGATGGTATGAAAGATCTTGTAAATTTACGCCATCTTGATATTAGAGGTACTAACTTGCATGAGATGCCGATAGGCATGAACAAATTGACAAATTTGCAGTTTTTGAGTGACTATGTTGTTGGGAAGCATGAAGAGAATAAGATTAAAGAACTGGGAGCACTTGCAGATCTACACAAATCAATTTACATTGCCAAATTGGAGAATGTGGTTAATAGCAGTGAAGCTTTGGATGCAAGAATGTCTGACAAGGATGGCATTGATTCTATGAGATTGAGTTGGTCGTCGAATGAAGATGAGAATATAGTTGATTCCCAAATAGAAGAAGATATTCTGGACAAGTTACGACCTCATAATAATTTGAAAAAACTAGAAATCATTGGTTACATGGGTACAAGATTTCCAGATTGGTTGGAACATTTTTCCTACCACAACATAACCAAAATAAGATTGAGTGGTTGCAGGAATTGTTGTGTGCTTCCTTCACTTGGACAATTGCCCTTTTTGAAGTACCTCAAAATCTTTAATTTTGAAATGCTTGGGATTGTGGGTACTGAGTTTTACCAGAAGGACGAATCTTGTGTGAAGAAACCATTTCCAAAGCTTGAAACTCTTGAGTTTGAGTCATTGAATTGCTGGAAGGAGTGGTGTTCAATGAAGTTCAATTCATTTCCTCTACTTAAGCAGCTTATCATAAGGAAGTGTCCGATGTTAAGAGGAGAATTGCCGAATTATCTACCATCTTTGGAGTCACTTGAGATTGAGAATTGCGAGCAGCTCAGTTGTAGTCTTCCGAGAGCTCCAGCGATGACATATTTAAGAATAACTGGTGCCAATGAAGTGAGAATTGGGGAGCTACCTCCTTTACTGCGTCATCTGTCAATCGGAGGAAACAATCAAGTGGAGTGGGTGGTGGAGGCCATTACGCACAAGCAACTGACTTGCCTCACTTTTTTAAGCATATCAGATTGTTCCTCCCAGATATCATTTCCAGTGAGTGCTATTCCCCCATCACTAGAGAAGTTGAGGATCCAGAGTTGCAGAAAATTAGAATTCCAAATGGATGGCCAACATCACTCGCTGCAGGTATTATCAATAATCAGCAGCTGTGATTCAGTTACATCCTTCTCCTTGTTGGATGCCTTTCCAAATATCAAGGATGGTGAAATCAGCAATTGTGAAAAGATGGAGTGTATTGTGGTGTCAGGATCTCTTTCATGTCTCCATTCTTTATGGATCCATGATTGTGGGAGTTTGAAATCCATGTCAAAGGTATGGATGGCAGCACCTCAGCTACAGTATCTCGCAATAGGCCGTTGCCCAGAGATTGATTTGTCTGCTACAGGGGACCCAAACTGTAGCCTGAGATCTCTTCTAGTCTCCTACTACGAGAAACTGGGCAGCTCTGCACCATTCATGAATTCGCAATTTCATGGGCTTACTCATCTTGATATTTATGGTGAAGACGAGAGTGTGAAGTGCCTCCCAAAGGAAGGTTGGTTGCCTCCCTCCCTTGAGTCTCTCACACTGAATGGCATTAAAAGTGTGGAGACCTTGGATTGCAAGGGATTTGCCCACCTCACCTCCCTCCAACAATTAGATATTTCTGAATGTCTCAAGTTGGAAAACATTGATGGAGAAAAGCTACCTGCCTCTCTAATACGACTCACTATCACTCATACTCCTTTGCTGGGTAAACGGTGCGAGATGAAAGACCCACAGATTTGGCCCAAAATTTCCCACATCCAAGGCATTAGAGTTGATGGCAGATGGATTTGGTAA 3618 0.4116 MAEKLYGGAYLSSFVGAVLDNLSKIIEDDSVLNGNYSSLEWIQRLEKCLYDVGPVLDDAELKQFTDKRVKKWLADLQDALYSADDFLDQLSTKAATANPTATQTDPGISASCSRVVDSYIEDTRDMERIVGRVEFLVARKSYLRLKETAKVDMSWRIPSTSLVEPSKICGREEDKDAILKLLLNDDDTVDGDIPVIPIVGMGGIGKTTLAQMVYHDDKVKEMFAFRGWVCVSEEFDVVKVTKTIIEAITSSPCNLTDLNLLQHDLKEKLSRKKFFVVLDDVWNENYDDWNVLLKPFQKGVKGSKILITTRSKKVASVVETVSPHELRSLSDEDCWLVFSKHARLSPASMENPTLVEVGKDIIKKCDGLPLAAQALGGLLRGNSDVKYWNHLLKSEIWGHSDDGIKGINDYPFSKDELILLWMAENFLQPVGKKTMEEVGDGYFDELIARSFFQPQSTRHKIFVMHDLVHDLAMSFAGEFYYRGEDLGKADEIDSKTRHLSHNAKGNYPMSKLLGVCDGVENTRTFLEINLDRWIPFNMENAPCILLSKLLHLRALSFKSFPLESLPDSIGGLIHLRYLDLSETYIVTLPESLCKLYNLQTLKLFECQKLKKLPDGMKDLVNLRHLDIRGTNLHEMPIGMNKLTNLQFLSDYVVGKHEENKIKELGALADLHKSIYIAKLENVVNSSEALDARMSDKDGIDSMRLSWSSNEDENIVDSQIEEDILDKLRPHNNLKKLEIIGYMGTRFPDWLEHFSYHNITKIRLSGCRNCCVLPSLGQLPFLKYLKIFNFEMLGIVGTEFYQKDESCVKKPFPKLETLEFESLNCWKEWCSMKFNSFPLLKQLIIRKCPMLRGELPNYLPSLESLEIENCEQLSCSLPRAPAMTYLRITGANEVRIGELPPLLRHLSIGGNNQVEWVVEAITHKQLTCLTFLSISDCSSQISFPVSAIPPSLEKLRIQSCRKLEFQMDGQHHSLQVLSIISSCDSVTSFSLLDAFPNIKDGEISNCEKMECIVVSGSLSCLHSLWIHDCGSLKSMSKVWMAAPQLQYLAIGRCPEIDLSATGDPNCSLRSLLVSYYEKLGSSAPFMNSQFHGLTHLDIYGEDESVKCLPKEGWLPPSLESLTLNGIKSVETLDCKGFAHLTSLQQLDISECLKLENIDGEKLPASLIRLTITHTPLLGKRCEMKDPQIWPKISHIQGIRVDGRWIW 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60847g00003 1205 FunFam Probable disease resistance protein At1g61300 155 322 - -
Stsc60847g00003 1205 Gene3D - 15 129 - -
Stsc60847g00003 1205 PANTHER DISEASE RESISTANCE PROTEIN RP 71 871 IPR044974 GO:0006952
Stsc60847g00003 1205 Pfam NB-ARC domain 172 393 IPR002182 GO:0043531
Stsc60847g00003 1205 Pfam Rx N-terminal domain 14 98 IPR041118 -
Stsc60847g00003 1205 Gene3D Ribonuclease Inhibitor 701 879 IPR032675 -
Stsc60847g00003 1205 Gene3D Ribonuclease Inhibitor 531 690 IPR032675 -
Stsc60847g00003 1205 SUPERFAMILY L domain-like 882 1191 - -
Stsc60847g00003 1205 SUPERFAMILY L domain-like 460 910 - -
Stsc60847g00003 1205 PRINTS Disease resistance protein signature 195 210 - -
Stsc60847g00003 1205 PRINTS Disease resistance protein signature 268 282 - -
Stsc60847g00003 1205 PRINTS Disease resistance protein signature 856 872 - -
Stsc60847g00003 1205 PRINTS Disease resistance protein signature 365 379 - -
Stsc60847g00003 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 406 IPR027417 -
Stsc60847g00003 1205 Gene3D - 151 322 IPR027417 -
Stsc60847g00003 1205 Gene3D - 328 414 IPR042197 -
Stsc60847g00003 1205 Gene3D Ribonuclease Inhibitor 880 1198 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60847g00003 Stsc-Chr60847 24158 27837 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60847g00003 192 636 WRKY Transcription Factor Family AT5G45050 23.265 1.64e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60847g00003 - - aip:107626318 1742.63