Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60846g00001 | ATGGCCACGACGCCGGCGACGGCTCAGCCGTCGTGGCTCATTGAGAATCCAGAATATATTTCCAATAGATTTTACATGGCAGCCGATTCTTATTCTGGCATTCCTACTCCTCCTATAGTTCAAGAAATTGCAAATGGAAATGAGAAAGGTCTTCAACCCCAAATAAATATCCAGGGATACATACTAGGAAACCCTAAAACGACATCTGAAGAAGGAAATTATCGGGTCCAATATGTTCATGGAATGGCACTTATCTCTGATGAACTTTATTTGTCATTGAAGAAAAATTGTAAAGGAGAGTATCAAAATATAGATCCTGAAAATAAATTGTGTTTAAGAGACATGGAGTACTACAGCAAGTGCCTTGAAAAAATTGATATTTATTTTATTTTAAACCCATTTTGCACCGATGATTGGCTTAAACAACAAGAGAAAGGGATGCAAAGGAGATCTTTGGCTCGAAATATAGAGGCCCGTTTCGAAACGCCTCTTATAGTGCCAGATATAGCCTGCGAGAATTTTCTTTTCTTCCTGTTGACTCAATGGGCCAACCACAAGAGCGTACGCGAGGCTCTACACATTGGAGAGGGAACTATAGGAGAATGGTCACGTTGTTATAAACATAATTATGAATCTAACATCCTTAACAGTGTTCCGTTTCATGTAAATCTTAGTGCAAAAGGTTATCGTTCTTTGATTTTCAGTGGAGACCATGATGCAGTAGTTCCTTTTATCTCGACTCAGGCATGGATAAAGTCGCTAAACTACTCCATTGTAGATGATTGGAGGCCATGGTATTTAAATGACCAAGTTGCAGGATATACCCGGACTTACTCAAACAAAATGACATTTGCAACTTTGAAGGGTGCAGGACATACAGCTGCTGAATTGAAGCCTGATGAAAGTTATGCCATGTTTGTTAGATGGATATCTGATAAGCCTTTGTAA | 948 | 0.3924 | MATTPATAQPSWLIENPEYISNRFYMAADSYSGIPTPPIVQEIANGNEKGLQPQINIQGYILGNPKTTSEEGNYRVQYVHGMALISDELYLSLKKNCKGEYQNIDPENKLCLRDMEYYSKCLEKIDIYFILNPFCTDDWLKQQEKGMQRRSLARNIEARFETPLIVPDIACENFLFFLLTQWANHKSVREALHIGEGTIGEWSRCYKHNYESNILNSVPFHVNLSAKGYRSLIFSGDHDAVVPFISTQAWIKSLNYSIVDDWRPWYLNDQVAGYTRTYSNKMTFATLKGAGHTAAELKPDESYAMFVRWISDKPL | 315 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60846g00001 | 315 | FunFam | Carboxypeptidase | 217 | 312 | - | - | |
Stsc60846g00001 | 315 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 11 | 299 | IPR001563 | GO:0004185|GO:0006508 | |
Stsc60846g00001 | 315 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 12 | 37 | IPR001563 | GO:0004185|GO:0006508 | |
Stsc60846g00001 | 315 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 282 | 295 | IPR001563 | GO:0004185|GO:0006508 | |
Stsc60846g00001 | 315 | FunFam | Carboxypeptidase | 170 | 314 | - | - | |
Stsc60846g00001 | 315 | Pfam | Serine carboxypeptidase | 11 | 311 | IPR001563 | GO:0004185|GO:0006508 | |
Stsc60846g00001 | 315 | SUPERFAMILY | alpha/beta-Hydrolases | 11 | 314 | IPR029058 | - | |
Stsc60846g00001 | 315 | Gene3D | alpha/beta hydrolase | 5 | 315 | IPR029058 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60846g00001 | Stsc-Chr60846 | 22002 | 30552 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60846g00001 | 160 | 315 | Calmodulin-binding Proteins | AT2G22960 | 56.688 | 4.04e-59 | 186 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60846g00001 | K16296 | - | gmx:100780069 | 428.713 |