Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60846g00001 ATGGCCACGACGCCGGCGACGGCTCAGCCGTCGTGGCTCATTGAGAATCCAGAATATATTTCCAATAGATTTTACATGGCAGCCGATTCTTATTCTGGCATTCCTACTCCTCCTATAGTTCAAGAAATTGCAAATGGAAATGAGAAAGGTCTTCAACCCCAAATAAATATCCAGGGATACATACTAGGAAACCCTAAAACGACATCTGAAGAAGGAAATTATCGGGTCCAATATGTTCATGGAATGGCACTTATCTCTGATGAACTTTATTTGTCATTGAAGAAAAATTGTAAAGGAGAGTATCAAAATATAGATCCTGAAAATAAATTGTGTTTAAGAGACATGGAGTACTACAGCAAGTGCCTTGAAAAAATTGATATTTATTTTATTTTAAACCCATTTTGCACCGATGATTGGCTTAAACAACAAGAGAAAGGGATGCAAAGGAGATCTTTGGCTCGAAATATAGAGGCCCGTTTCGAAACGCCTCTTATAGTGCCAGATATAGCCTGCGAGAATTTTCTTTTCTTCCTGTTGACTCAATGGGCCAACCACAAGAGCGTACGCGAGGCTCTACACATTGGAGAGGGAACTATAGGAGAATGGTCACGTTGTTATAAACATAATTATGAATCTAACATCCTTAACAGTGTTCCGTTTCATGTAAATCTTAGTGCAAAAGGTTATCGTTCTTTGATTTTCAGTGGAGACCATGATGCAGTAGTTCCTTTTATCTCGACTCAGGCATGGATAAAGTCGCTAAACTACTCCATTGTAGATGATTGGAGGCCATGGTATTTAAATGACCAAGTTGCAGGATATACCCGGACTTACTCAAACAAAATGACATTTGCAACTTTGAAGGGTGCAGGACATACAGCTGCTGAATTGAAGCCTGATGAAAGTTATGCCATGTTTGTTAGATGGATATCTGATAAGCCTTTGTAA 948 0.3924 MATTPATAQPSWLIENPEYISNRFYMAADSYSGIPTPPIVQEIANGNEKGLQPQINIQGYILGNPKTTSEEGNYRVQYVHGMALISDELYLSLKKNCKGEYQNIDPENKLCLRDMEYYSKCLEKIDIYFILNPFCTDDWLKQQEKGMQRRSLARNIEARFETPLIVPDIACENFLFFLLTQWANHKSVREALHIGEGTIGEWSRCYKHNYESNILNSVPFHVNLSAKGYRSLIFSGDHDAVVPFISTQAWIKSLNYSIVDDWRPWYLNDQVAGYTRTYSNKMTFATLKGAGHTAAELKPDESYAMFVRWISDKPL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60846g00001 315 FunFam Carboxypeptidase 217 312 - -
Stsc60846g00001 315 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 299 IPR001563 GO:0004185|GO:0006508
Stsc60846g00001 315 PRINTS Carboxypeptidase C serine protease (S10) family signature 12 37 IPR001563 GO:0004185|GO:0006508
Stsc60846g00001 315 PRINTS Carboxypeptidase C serine protease (S10) family signature 282 295 IPR001563 GO:0004185|GO:0006508
Stsc60846g00001 315 FunFam Carboxypeptidase 170 314 - -
Stsc60846g00001 315 Pfam Serine carboxypeptidase 11 311 IPR001563 GO:0004185|GO:0006508
Stsc60846g00001 315 SUPERFAMILY alpha/beta-Hydrolases 11 314 IPR029058 -
Stsc60846g00001 315 Gene3D alpha/beta hydrolase 5 315 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60846g00001 Stsc-Chr60846 22002 30552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60846g00001 160 315 Calmodulin-binding Proteins AT2G22960 56.688 4.04e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60846g00001 K16296 - gmx:100780069 428.713