Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60839g00005 ATGATTCGTTTGTTTCTTCTTGTCCTTGTTGTGTTGGGTAGTGCCAATGCACAACTTTCCAAAGATTTCTATTCAAGTTCATGTCCGAAGCTCCTTGACACTGTGAAATGCACAGTGGAAGCTGCCATAGCAAAAGAGACTCGCATGGGTGCTTCTCTCCTACGTTTGTTCTTCCATGATTGTTTTGTTAATGGATGTGACGGTTCAATTCTTCTGGACGACACATCAAGCTTCACGGGAGAGAAGAATGCGGGCCCCAACAAGAACTCCGCCCGTGGATTCGAAGTGATCGACGCCATCAAGTCGGCCGTTGAGAAAGTGTGCCCTGGTGTTGTCTCCTGCGCTGATATCCTCGCCATCGCTGCCAGAGACTCCGTCAACATCCTTGGAGGCCCTGCGTGGGACGTAAAACTTGGAAGAAGAGACGCAAGAACAGCGAGTCAAGGTGCTGCCAATAAAGGAATCCCAGCACCAACTTCAACCTTAAATCAACTCATCTCAACCTTCGCTAATCTTGGACTTTCCACCAGGGACTTGGTCGCCTTATCTGGTGGTCACACAATTGGACAAGCAAGGTGTACAACCTTCAGATCCCACATCTACAATGAGACCAACGAGTTAGTAGCATCCTTTGCTCAAACAAGGCAATCAAAATGCCCTAGGCCATCCGGTGTTGGGGACAACAACCTCGCACCCCTTGATCTCCAAACGCCGACGTCCTTCGACAATCACTACTTCAACAACCTCATCAACCGGAAAGGCCTCCTCCACTCTGACCAGCAACTCTTCAACGGAGGATCCACCGACTCCATCGTTCGCAGCTACAGCGCAAACCCTAGCTCGTTTTTCGCCGATTTTGCCAGTGCCATGATCAAGATGGGAGACATAAATCCCCTCACTGGATCCCAGGGAGAGGTTAGAAAGAATTGCAGGAGGATCAACTAA 945 0.4952 MIRLFLLVLVVLGSANAQLSKDFYSSSCPKLLDTVKCTVEAAIAKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNAGPNKNSARGFEVIDAIKSAVEKVCPGVVSCADILAIAARDSVNILGGPAWDVKLGRRDARTASQGAANKGIPAPTSTLNQLISTFANLGLSTRDLVALSGGHTIGQARCTTFRSHIYNETNELVASFAQTRQSKCPRPSGVGDNNLAPLDLQTPTSFDNHYFNNLINRKGLLHSDQQLFNGGSTDSIVRSYSANPSSFFADFASAMIKMGDINPLTGSQGEVRKNCRRIN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60839g00005 314 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 CDD secretory_peroxidase 18 313 IPR033905 GO:0004601|GO:0042744
Stsc60839g00005 314 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
Stsc60839g00005 314 Gene3D - 22 314 - -
Stsc60839g00005 314 ProSiteProfiles Plant heme peroxidase family profile. 18 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 Pfam Peroxidase 36 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 PANTHER PEROXIDASE 72-RELATED 15 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 Gene3D Peroxidase, domain 2 156 293 - -
Stsc60839g00005 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Stsc60839g00005 314 SUPERFAMILY Heme-dependent peroxidases 18 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 FunFam Peroxidase 22 164 - -
Stsc60839g00005 314 FunFam Peroxidase 156 293 - -
Stsc60839g00005 314 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60839g00005 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60839g00005 Stsc-Chr60839 28812 31128 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60839g00005 17 314 Peroxidase AT5G05340 74.832 5.16e-167 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60839g00005 K00430 - gmx:100803637 506.908