Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60838g00007 ATGATGGGTACAGAAAGAGTGAACCTTTTAAGATATGAGGGTTTGGCCAAGCTTGGTGGAACTCTTGTCTGTGTTTTTGGTGCTATATTGATGGTTTTGTATCGCGGTCCGGCCGTAGTCGGATATGCTGAAATGGACTTTGTTTCACATAATGAAATCAGTGCTAAAGGTCAACCAGAGCCTTCTGGTTGGTTGGTTTCTGGTTTAATGGATCTTGGACTCGACCATTTTCATCTTGGGGTTCTCTGTTTCATAGGGAACACCTTGTGCATGGCTGCTTTTCTTGCCATTCAGGCGCCAATACTAAAAAAGTACCCTGCCAACCTATCTGTCATTGCATTTTCATACTTCTTCGGAGCTCTACTAATGGTGATCACATCTATGTTTGTGAGTAATGAGGCAACCGACTGGATTTTGACGCGGTCTGAGACACTTGCTGTTATTTATGCTGGTGTTATTGCATCGGCCCTTAACTATGGACTGATTACATGGTGCAACAAGATCTTGGGGCCAGCAATGGTTGCCCTTTATAATCCACTTCAACCTGGTGCTTCTGCTCTCTTGTCTAGAATTTTCCTTGGGAGTCCAATTTATATGGGAAGCATTCTTGGAGGTTCTTTGATTATTGCTGGTTTGTATGCTGTTACATGGGCATCATTTAGAGAAAGACAAGCATCAAGTGGAGTTCTTCCTAATCATCATCATCATCATGGATCTTGGGTCTCTGATGACAAGAGTTCATATCAGAGAGGTCTCATGCTCCCCAGCTTAACCCCAAAGCCTTCTGATTAA 792 0.4318 MMGTERVNLLRYEGLAKLGGTLVCVFGAILMVLYRGPAVVGYAEMDFVSHNEISAKGQPEPSGWLVSGLMDLGLDHFHLGVLCFIGNTLCMAAFLAIQAPILKKYPANLSVIAFSYFFGALLMVITSMFVSNEATDWILTRSETLAVIYAGVIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSILGGSLIIAGLYAVTWASFRERQASSGVLPNHHHHHGSWVSDDKSSYQRGLMLPSLTPKPSD 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60838g00007 263 SUPERFAMILY Multidrug resistance efflux transporter EmrE 136 222 - -
Stsc60838g00007 263 PANTHER WAT1-RELATED PROTEIN 5 223 IPR030184 GO:0016020|GO:0022857
Stsc60838g00007 263 Pfam EamA-like transporter family 79 216 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60838g00007 Stsc-Chr60838 29381 32029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60838g00007 1 227 Nodulin-like Gene Family AT5G45370 64.317 1.52e-103 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60838g00007 - - gmx:100809051 412.535