Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60838g00005 ATGGCCTTAACGAGGCATTTGATAAATCCGTCGCACATCTTTTTGATNNNNNNNNNNGATCTACCTAGGCAGCAGATAGAGCTTAAGCATCCTTGCTTGCATAAAGGGTATAAGGAGCAATTCACTTGCTCTCGTTGTTCCTTTAATAACCATGTAGGAGGAAGTCCTATAGGTAATGGGAAAATGTTGGATATAAGAGGAGGATCAGGAATTCCACTTGTGCTTGTAGGTCATCCAAATTGGCAACAGTGCAGTGCAGTTGCAAAAGTGGCAGTCAATTTGTCTGAATGGTCTGATCTCAGTCCAGGAATTGATTGTGAAGTGCATCCATGTGCCCTACGTGATAATCTTCCACGTCCGATAGGCCACTTTTATGTGATCTCTGGATTTTTTGTGGTGTATCGATTTTTCAACCTAAGTTCCGAAGCCACACTTGAAGATGTACTGGAAAAGGGTAGGGAATTCTGTGGTAAAAGATGGGACATTGCAAAAAGGAGTGTTGCTCCTCAGCCCTTTATTGAGCAATACTGCTTTAGGGCTCCATATGTTGTATCACTTCTGAGAGAGGGTTTGCACATTACTGATAAAGATATAACCGTTGGATCTGGAAGCATCACTTGGACACTTGGGGTTGCTTTGCTGGAAGCTGGGAAGGCATATTCTACCAGATTTGGGCTTCGCAATTTTGATTTGCTTGACACGAAGATAAATCCTTTCATTCTTATACTCATTTTGATCCTTTCTTTTATCCTGCTTCTTTGTGCTTTATCATGTGTTAGCAATTGGATGCCAAGATTTTTCCGGAGGCAATATCTTCCACTTTTCAGGAATAACAGTGTCTCCAATATCCCATCACCTTTCCGGTTCCAGGGATGGAGTCCTATCATATCTGGGGAGGCAAGGGTAAAGACGCCACTTAGCCCAAAAATCACGGGTCCACAAGATAGACCATTTAGCGTTGGGGCCGATGATAGTGCCGGCATCCAGCTTGCGGAATCTTCATTTTACCCGTCAGCTAGTAATGTTTCACATAGTTATTCCTCAAACAATTTAGGGCAGATGCCGTTTGAAAGCAGTAATATGGGGACCTTCTGGTCACCCCACAGGAGTCAAATGCGCCTGCAGAGCAGAAGATCGCAATCTCGCGAAGATCTGAATTCCTCGCTGAATGAAGTGAACACGGCCAAGGTTTAG 1194 0.4347 MALTRHLINPSHIFLXXXXDLPRQQIELKHPCLHKGYKEQFTCSRCSFNNHVGGSPIGNGKMLDIRGGSGIPLVLVGHPNWQQCSAVAKVAVNLSEWSDLSPGIDCEVHPCALRDNLPRPIGHFYVISGFFVVYRFFNLSSEATLEDVLEKGREFCGKRWDIAKRSVAPQPFIEQYCFRAPYVVSLLREGLHITDKDITVGSGSITWTLGVALLEAGKAYSTRFGLRNFDLLDTKINPFILILILILSFILLLCALSCVSNWMPRFFRRQYLPLFRNNSVSNIPSPFRFQGWSPIISGEARVKTPLSPKITGPQDRPFSVGADDSAGIQLAESSFYPSASNVSHSYSSNNLGQMPFESSNMGTFWSPHRSQMRLQSRRSQSREDLNSSLNEVNTAKV 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60838g00005 397 Pfam GDA1/CD39 (nucleoside phosphatase) family 27 214 IPR000407 GO:0016787
Stsc60838g00005 397 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 25 219 IPR000407 GO:0016787
Stsc60838g00005 397 MobiDBLite consensus disorder prediction 360 374 - -
Stsc60838g00005 397 Gene3D Exopolyphosphatase. Domain 2 4 202 - -
Stsc60838g00005 397 MobiDBLite consensus disorder prediction 381 397 - -
Stsc60838g00005 397 MobiDBLite consensus disorder prediction 360 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60838g00005 Stsc-Chr60838 25039 28560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60838g00005 20 397 Nodulin-like Gene Family AT4G19180 61.458 1.04e-141 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60838g00005 - - lja:Lj0g3v0174799.1 569.696