Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60836g00006 ATGCTACCACAAATATTAGCTATCCCTGCAGCAATTCTCTTTGTGATATTCACATTCATCATTTTTCTAAAGCCTCGACATAAAGATTGGAATAGCACTAAAAAACTACCACCAGGTCCAAAGCCTTTACCAATCATTGGTAACATTCATATCTTAGGAAAACTCCCACACCGCACGCTTCAGGCCCTTGCCATCAAATATGGACCCATAATGTCCCTAAAGCTAGGACAAGTCCCTGCTGTTGTGATTTCTTCTCCAGAATTTGCTGAACTCTTCTTGAAAACTCATGACATGGTTTTTGCAAGCCGGCCTAAACTTCAGTTAGTGGAGATTACTTTTGGCAGAAAGGGGTTGGTGTTTACGGAGTACGGTGGTTATTGGCGCAATGTGAGGAAGTTGTGCATCATGCAACTTCTAAGTGCATCCAAGATTGAGATGTTTGCTCCTTTGAGGAAGAAGGAGTTGGGATTGTTGGTGAATACACTTAAGAAGGCTTCAGATTCATGTGAAGTTGTGGATCTCAGTGAGTTTATTGGGGAGGTTGTTGAGAATATTACTTATAACATCATATTGGGTCGTAGCAAAGATGACAGGTTTGACATCAAGGGCCTTATTCATGAGATTATGAACTTGATTGGTACTTTCAATGTTGGAGATTATGGACTAAAGAGAAGAACAATGAAAGCATTCAAGGCTGTTAATGAAGCATTGGATCAGATCATCAACGATCACGAACACTCTTCATCAGTTGAATCCCCACAATGTAATAAGGATTTCATAGACATATTACTAAGCTATATGAATCAACCAATGGACCCACATGATCATGAACAAAGACACATAGTTGGAAGAGCCAATATAAAGGCGATCATATTGGATATGATTGCTGGAGCATTCGACACTTCCAAAACCGCAATTGAATGGGGTATGTCAGAACTCATAAAAAATCCAACAACAATGAAGAAACTTCAAAACGAGATTGAAGCCCTTGTAGGAATAAAAAGACAAGTGGAAGAAAAAGACTTAAATAAATTGCCTTATCTTGACATGGTTGTGAAGGAGATATTACGATTATACCCTGTTGGGCCATTGCTTGTGCCACACGAGTCTTTAGAAGATGTTACCATAAATGGCTATTTCATAGAGAAAAATACACGAATCATGGTGAATGCATGGGCCATAGGGAGAGATCTGAGAGTTTGGTCGGAAAATTGTGACTTGTTTTTCCCAGAAAGATTTGAGAACAATGATGTAGATGTGAAGGGGCGTGATTTTAGACTGATACCATTTGGGTCAGGTCGAAGAGGGTGTCCTGGGACGAATATGGGTTTAACTACCACTAAGATTGTTTTAGCACAATTAGTGCATTGTTTTAGTTGGGAACTTCCGTTGGGTATGTCTTCAAAGGATTTAGATATGACTGAGGATTCTGGCCTCGCAATACCAAGAAGTAAGCACTTACTAGCTACGCCGACCTATCGCTTACTGGGTGATGAGGCTTAA 1503 0.3999 MLPQILAIPAAILFVIFTFIIFLKPRHKDWNSTKKLPPGPKPLPIIGNIHILGKLPHRTLQALAIKYGPIMSLKLGQVPAVVISSPEFAELFLKTHDMVFASRPKLQLVEITFGRKGLVFTEYGGYWRNVRKLCIMQLLSASKIEMFAPLRKKELGLLVNTLKKASDSCEVVDLSEFIGEVVENITYNIILGRSKDDRFDIKGLIHEIMNLIGTFNVGDYGLKRRTMKAFKAVNEALDQIINDHEHSSSVESPQCNKDFIDILLSYMNQPMDPHDHEQRHIVGRANIKAIILDMIAGAFDTSKTAIEWGMSELIKNPTTMKKLQNEIEALVGIKRQVEEKDLNKLPYLDMVVKEILRLYPVGPLLVPHESLEDVTINGYFIEKNTRIMVNAWAIGRDLRVWSENCDLFFPERFENNDVDVKGRDFRLIPFGSGRRGCPGTNMGLTTTKIVLAQLVHCFSWELPLGMSSKDLDMTEDSGLAIPRSKHLLATPTYRLLGDEA 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60836g00006 500 Gene3D Cytochrome P450 27 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60836g00006 500 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60836g00006 500 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60836g00006 500 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60836g00006 500 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60836g00006 500 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60836g00006 500 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60836g00006 500 Coils Coil 320 340 - -
Stsc60836g00006 500 PANTHER CYTOCHROME P450 93A3-LIKE 13 495 - -
Stsc60836g00006 500 FunFam Cytochrome P450 83B1 23 490 - -
Stsc60836g00006 500 CDD CYP71-like 66 487 - -
Stsc60836g00006 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Stsc60836g00006 500 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60836g00006 500 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60836g00006 500 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60836g00006 500 Pfam Cytochrome P450 37 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60836g00006 500 SUPERFAMILY Cytochrome P450 37 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60836g00006 Stsc-Chr60836 31017 34114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60836g00006 37 496 Cytochrome P450 AT5G57260 36.961 7.92e-112 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60836g00006 - - adu:107490427 783.867