Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60835g00006 ATGCTCTATGGAGCTTTTAAGTCCGAAACGCGTGCAATCACATTGGCCAATCAAAGAGAAAGAGGTCAACAACCTTGTCAAACGGATCGCTTCCGAAGAAGGATCGTTTTCAATCTTAGCCAAGCAATTGTATCAATGATGTTTTCCATTACTTCGATGGCGGCGTTTGGCAAGAAGTACAAAGAACAAGAAGAGTTCATTAAAGTTGTTAGAGAGGTTTTGAAGCTGGCCGGTGGTTTTTACATTGGAGACTTGTTTCCATCGGCAAAATGGATTCAGAACCTAAGTGGGATTAGGCCTAAGCTTGAGGATTTGCATAGAAGAGTTGATAGGGTTCTAGAGATCATCATCAATGACCATAGACAATCAAGAACTAATAAAGAAGTGGAGGATCTTGTTGATGTTCTATTGAAATTTGAGGGGAGTAGTAGTGATGTGGATCTTCGCTTAACCAACGACAATATCAAGGCTATGATATTTGATGTCTTCACCGGCGGAAGTGACACAGCAGCCACTACCATTAATTGGGCAATGGCTGAGATGATGAAGAATCCAAAAATATTGAAGAAAGCAGAAGCTGAAGTGAGAGAGGTATTAGATAGAAGAACAACAGGATCAAAGGTTGATGAAACATGCATTGAAGAAATGAAATACTTGAAAGCAGTCATCAAAGAGACGCTGAGATTACACCCTCCCGGCCCTCTCTTGATTCCGCGGGAATGCGGACGAGCGTGCGAAATCCATGGATATCACATACCAGCCAAAAGCAAGATCATAATCAATGCATGGGCGATCGCAAGAGATCCGAACTACTGGACCGAACCAGAGAGGTTTTATCCCGAGAGATTTGTTGATAGCACAATCGATTTCAAAGGGAATAATTTCGAGTTCATTCCGTTTGGTGCTGGACGAAGAATCTGCCCTGGAATGCACTATGGTGTTGCAAGTGTTTAG 954 0.4245 MLYGAFKSETRAITLANQRERGQQPCQTDRFRRRIVFNLSQAIVSMMFSITSMAAFGKKYKEQEEFIKVVREVLKLAGGFYIGDLFPSAKWIQNLSGIRPKLEDLHRRVDRVLEIIINDHRQSRTNKEVEDLVDVLLKFEGSSSDVDLRLTNDNIKAMIFDVFTGGSDTAATTINWAMAEMMKNPKILKKAEAEVREVLDRRTTGSKVDETCIEEMKYLKAVIKETLRLHPPGPLLIPRECGRACEIHGYHIPAKSKIIINAWAIARDPNYWTEPERFYPERFVDSTIDFKGNNFEFIPFGAGRRICPGMHYGVASV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60835g00006 317 PRINTS E-class P450 group I signature 154 171 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60835g00006 317 PRINTS E-class P450 group I signature 174 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60835g00006 317 PRINTS E-class P450 group I signature 261 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60835g00006 317 PRINTS E-class P450 group I signature 46 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60835g00006 317 PRINTS E-class P450 group I signature 297 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60835g00006 317 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60835g00006 317 Pfam Cytochrome P450 36 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60835g00006 317 PRINTS P450 superfamily signature 298 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60835g00006 317 PRINTS P450 superfamily signature 165 182 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60835g00006 317 PRINTS P450 superfamily signature 221 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60835g00006 317 Gene3D Cytochrome P450 7 317 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60835g00006 317 SUPERFAMILY Cytochrome P450 36 315 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60835g00006 317 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 300 309 IPR017972 GO:0005506|GO:0016705
Stsc60835g00006 317 PANTHER OS08G0105600 PROTEIN 34 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60835g00006 Stsc-Chr60835 25215 27687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60835g00006 38 317 Cytochrome P450 AT3G26330 42.160 7.80e-76 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60835g00006 - - lja:Lj0g3v0164489.1 378.252