Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60826g00007 GAAGACAATCGGGAGAAGTCCTTGAACTGGGAAGATAGACTCCGAGTAGCATTGAATGCAGCCCAAGGATTGGAATATCTACATAATGGATGTAAGACACCTATAATCCACAGAGATGTAAAATGCACAAATATTCTATTAGATGAAAACTTCCATGCCAAACTTGCTGATTTTGGATTATCCAAATGCTTTGCTGCTGACGGCGATACACATGTGTCAACAATTGTGGCTGGAACTCCAGGCTACCTAGGTCCTGAGTACACGACATCAAACAGATTAACAGAGAAAAGTGATGTGTATAGTTTTGGGGTAGTTCTTTTAAGGATAATCACAGGTCAACCAGTGATAATAATAGGAATGGAAGACATGGCTCGCCATATAAGTCAGCGGGTTAAGTCCATGGTTGCTGAAGGAGATATAACAAAACTTGTTGACTCAAGATTACAAGGAGATTTTGACGGTAACTCTGCATGGAGAGCAGTTGAAATTGCAATGGCCTCTGTGTCTGCCATTTCAGCAGAAAGGCCATACATGAGTGATATAGTGAAAGAGTTAAAGTAG 561 0.4082 EDNREKSLNWEDRLRVALNAAQGLEYLHNGCKTPIIHRDVKCTNILLDENFHAKLADFGLSKCFAADGDTHVSTIVAGTPGYLGPEYTTSNRLTEKSDVYSFGVVLLRIITGQPVIIIGMEDMARHISQRVKSMVAEGDITKLVDSRLQGDFDGNSAWRAVEIAMASVSAISAERPYMSDIVKELK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60826g00007 186 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60826g00007 186 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 1 186 - -
Stsc60826g00007 186 PANTHER OS07G0107800 PROTEIN-RELATED 6 186 - -
Stsc60826g00007 186 Pfam Protein kinase domain 6 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60826g00007 186 SMART serkin_6 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60826g00007 186 Gene3D Transferase(Phosphotransferase) domain 1 1 186 - -
Stsc60826g00007 186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 35 47 IPR008271 GO:0004672|GO:0006468
Stsc60826g00007 186 SUPERFAMILY Protein kinase-like (PK-like) 6 185 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60826g00007 Stsc-Chr60826 44210 45467 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60826g00007 8 186 Receptor kinase-like Gene Family AT1G51800 59.890 3.38e-70 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Stsc60826g00007 Pkinase 1.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60826g00007 - - ahf:112730230 332.413