Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60806g00002 ATGAATCCATCTTTTGAACCATGCCCTCTGAATTCCGTTATTGAAGAGGTGCCAGATCATAGTCACATATCAGATGATGAAATCCCTAGAACAGGCATGTGTTTTGATTCTTTGGAGCTGGAAGCTCATGATTTTTACAAGAATTATGTGGAGAAAGTGGGATTTGTTATTAAGATTAGGAATACAAATTATGTTAAGAATGCTAAGGGTGAGAAGATTCCAATTAATCAATCAATCCATTGTAATCGAGAGGGTAATCGCATGTCACGAGCGAAGGCCCCAAGAAGATCGAAGAAGATCGCGGCTGCCATGTGCAATGCAAGGGTGTATGTCAAGTTTAACAAAGACAATAGTAAATGGTTTCCAAAATTTGGACCAATACAGTACAGATGA 393 0.3868 MNPSFEPCPLNSVIEEVPDHSHISDDEIPRTGMCFDSLELEAHDFYKNYVEKVGFVIKIRNTNYVKNAKGEKIPINQSIHCNREGNRMSRAKAPRRSKKIAAAMCNARVYVKFNKDNSKWFPKFGPIQYR 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60806g00002 130 Pfam FAR1 DNA-binding domain 44 120 IPR004330 -
Stsc60806g00002 130 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60806g00002 Stsc-Chr60806 25349 25877 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc60806g00002 FAR1 4.3e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60806g00002 - K17604 ahf:114925969 120.168