Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60795g00005 ATGGATTCTGTGAATTTGGATTGCCTCACACCAGTCGATCATCTTTCTGAAGATCATGAGCAGATTTCACAAGAATGTTATAATGTTGGAGTGGAACTACCATATGATGATCCTATGAATCCATCTTCTGAACCATGCCCTCTGAATTCTGTTATTGAAGAGGTGCCAGATCATAGTCACATATCAGAGGATGAAATCCCTAGAACTGGCATGTGTTTTGATTCTTTGGAGGAAGCTCATGATTTTTACAAGAATTATGCGGAGAAAGTGGGATTTGTTATCAAGATTAGGAATACAAATCATGTTAAAAATGCTAAGGGTGAGAAGATTCCAATTAATCAGTCAATCCATTGTAATCGAGAGGGTAATCGCATATCACGAGCGAAGGCACCAAGAAGATCGAAGAAGATCACGGCTGCCATGTGCAATGCAAGG 435 0.3977 MDSVNLDCLTPVDHLSEDHEQISQECYNVGVELPYDDPMNPSSEPCPLNSVIEEVPDHSHISEDEIPRTGMCFDSLEEAHDFYKNYAEKVGFVIKIRNTNHVKNAKGEKIPINQSIHCNREGNRISRAKAPRRSKKITAAMCNAR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60795g00005 145 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 27 145 - -
Stsc60795g00005 145 Pfam FAR1 DNA-binding domain 81 144 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60795g00005 Stsc-Chr60795 47482 48209 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc60795g00005 FAR1 6.8e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60795g00005 - K17604 ahf:112772717 119.398