Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60794g00010 ATGGAAACCAACAACCTCCAGCGCCGCTTCTCACTCGGCAGACAATCCTCCATGGCGCCGGAGATCCCCTCCGAAGAAGACGCTGCCGAGGAGTTCCTGCCGGAGCCAGTTCACGAATCCGTGCGGATGATGTACCTTGCCAACGAAGGTGACTTGGAAGGGATTAAGGAGCTCTTAGATTCCGGCAGTGACGTCAACTTCAGGGACATTGACGGCCGCACCGCCCTCCACGTCGCCTCCTGCCAGCGTCGCACCGACGTCGTTGACTTGTTGCTGCAAAATGGAGCTCAGGTTGACCCCAGGGACCGCTGGGGCAGCACGCCTTTAGCTGATGCAATGTACTACAAGAATCATGATGTTGTAAAGCTTTTGGAGAAACATGGTGCAAAACCCCCGGTTGCTCCTATGCATGTCCAAAATGCCCGTGAAGTCCCTGAATATGAGATTGATCCTAAAGAACTTGATTTTACAAATAGTGTTGGGATAACTAAGGGGACTTTCCGTATTGCATTGTGGCGAGGAATTCAGGTTGCTGTCAAAACTCTTGAGGAGGATGTGTTCACTGATGATGATAAAGTTAAGGCGTTTCACGATGAGCTTGCATTACTTCAGAAAGTTCGGCATCCAAATGTAGTTCAGTTTTTAGGTGCTGTAACACAAAGCACCCCAATGATAATTGTTACAGAATATTTGCCCCTGGGAGATCTTCGTGCCTATTTGAAGCGGAAAGGTGCATTAAAACCAGGAACAGCTGTAAAATTTGCACTTGATATAGCTAGGGGAATGAATTATTTGCATGAACATAAACCAGAAGCCATTATACACCGAGATCTCGAACCTTCAAATATTCTTCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTCAGCAAGTTGCTGAAATTTGCCAAAACAGTCAAAGAAGACAAACCAGTGACAAGCCAGGATACATCATGGCGCTATGTTGCTCCTGAGCTTTACAAGAATGAGGAATATGACACTAAAGTGGATGTGTTTTCATTTGCTCTAATACTACAGGAGATGATTGAAGGTTATCCACCATTTTATGCAAAGCCAGAAAATGAAGTTCCTAAGGAATATGTTGAAAATGAACGTCCGCCATTTAAAGCTTCACCCAAGCTTTATGCTTATGGACTTAGGCAGTTAGTAACACTAAATACATGTTATTGGCAGCAGATTTCAATGCTAAGTTTCAAAATACCTCACAAATAA 1239 0.4496 METNNLQRRFSLGRQSSMAPEIPSEEDAAEEFLPEPVHESVRMMYLANEGDLEGIKELLDSGSDVNFRDIDGRTALHVASCQRRTDVVDLLLQNGAQVDPRDRWGSTPLADAMYYKNHDVVKLLEKHGAKPPVAPMHVQNAREVPEYEIDPKELDFTNSVGITKGTFRIALWRGIQVAVKTLEEDVFTDDDKVKAFHDELALLQKVRHPNVVQFLGAVTQSTPMIIVTEYLPLGDLRAYLKRKGALKPGTAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKFAKTVKEDKPVTSQDTSWRYVAPELYKNEEYDTKVDVFSFALILQEMIEGYPPFYAKPENEVPKEYVENERPPFKASPKLYAYGLRQLVTLNTCYWQQISMLSFKIPHK 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60794g00010 412 Gene3D Transferase(Phosphotransferase) domain 1 153 403 - -
Stsc60794g00010 412 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Stsc60794g00010 412 Gene3D - 36 143 IPR036770 -
Stsc60794g00010 412 MobiDBLite consensus disorder prediction 1 18 - -
Stsc60794g00010 412 MobiDBLite consensus disorder prediction 1 28 - -
Stsc60794g00010 412 Pfam Protein kinase domain 173 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60794g00010 412 SMART ANK_2a 38 67 IPR002110 GO:0005515
Stsc60794g00010 412 SMART ANK_2a 71 102 IPR002110 GO:0005515
Stsc60794g00010 412 SMART ANK_2a 104 133 IPR002110 GO:0005515
Stsc60794g00010 412 Pfam Ankyrin repeats (3 copies) 43 131 IPR002110 GO:0005515
Stsc60794g00010 412 ProSiteProfiles Protein kinase domain profile. 149 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60794g00010 412 SUPERFAMILY Ankyrin repeat 43 134 IPR036770 -
Stsc60794g00010 412 SUPERFAMILY Protein kinase-like (PK-like) 172 381 IPR011009 -
Stsc60794g00010 412 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515
Stsc60794g00010 412 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 107 392 - -
Stsc60794g00010 412 PIRSF ILK 2 404 - -
Stsc60794g00010 412 FunFam Integrin-linked protein kinase family 19 147 - -
Stsc60794g00010 412 FunFam serine/threonine-protein kinase STY46-like 149 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60794g00010 Stsc-Chr60794 40632 44342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60794g00010 1 392 MAP Kinase Kinase Kinase AT4G18950 67.172 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Stsc60794g00010 Pkinase 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60794g00010 - - gmx:100795964 669.077