Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60794g00009 ATGGAAACCAACAACCTCCAGCGCCGCTTCTCACTCGGCAGACAATCCTCCATGGCGCCGGAGATCCCCTCCGAAGAAGACGCTGCCGAGGAGTTCCTGCCGGAGCCAGTTCACGAATCCGTGCGGATGATGTACCTTGCCAACGAAGGTGACTTGGAAGGGATTAAGGAGCTCTTAGATTCCGGCAGTGACGTCAACTTCAGGGACATTGACGGCCGCACCGCCCTCCACGTCGCCTCCTGCCAGCGTCGCACCGACGTCGTTGACTTGTTGCTGCAAAATGGAGCTCAGGTTGACCCCAGGGACCGCTGGGGCAGCACGCCTTTAGCTGATGCAATGTACTACAAGAATCATGATGTTGTAAAGCTTTTGGAGAAACATGGTGCAAAACCCCCGGTTGCTCCTATGCATGTCCAAAATGCCCGTGAAGTCCCTGAATATGAGATTGATCCTAAAGAACTTGATTTTACAAATAGTGTTGGGATAACTAAGGTTGCTGTCAAAACTCTTGAGGAGGATGTGTTCACTGATGATGATAAAGTTAAGGCGTTTCACGATGAGCTTGCATTACTTCAGAAAGTTCGGCATCCAAATGTAGTTCAGTTTTTAGGTGCTGTAACACAAAGCACCCCAATGATAATTGTTACAGAATATTTGCCCCTGGGAGATCTTCGTGCCTATTTGAAGCGGAAAGGTGCATTAAAACCAGGAACAGCTGTAAAATTTGCACTTGATATAGCTAGGGGAATGAATTATTTGCATGAACATAAACCAGAAGCCATTATACACCGAGATCTCGAACCTTCAAATATTCTTCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTCAGCAAGTTGCTGAAATTTGCCAAAACAGTCAAAGAAGACAAACCAGTGACAAGCCAGGATACATCATGGCGCTATGTTGCTCCTGAGCTTTACAAGAATGAGGAATATGACACTAAAGTGGATGTGTTTTCATTTGCTCTAATACTACAGGAGATGATTGAAGGTTATCCACCATTTTATGCAAAGCCAGAAAATGAAGTTCCTAAGGAATATGTTGAAAATGAACGTCCGCCATTTAAAGCTTCACCCAAGCTTTATGCTTATGGACTTAGGCAGTTAATAGAAGAATGTTTGGATGAAAAACCTCACAGAAGACCAACATTTAGGCAAATAATTGGGAGATTAGAAGACATCAACTACCATCTTGATCAAAAGAAGCGTTGGAAGGTTCAGACTCCTACATGCATCCAGCGTCTCGAGGCCCTATTTAGAGGGTACCGCACAAGCCCGAATAACCGATCATCTCGCTCTACACCAAGATAA 1341 0.4526 METNNLQRRFSLGRQSSMAPEIPSEEDAAEEFLPEPVHESVRMMYLANEGDLEGIKELLDSGSDVNFRDIDGRTALHVASCQRRTDVVDLLLQNGAQVDPRDRWGSTPLADAMYYKNHDVVKLLEKHGAKPPVAPMHVQNAREVPEYEIDPKELDFTNSVGITKVAVKTLEEDVFTDDDKVKAFHDELALLQKVRHPNVVQFLGAVTQSTPMIIVTEYLPLGDLRAYLKRKGALKPGTAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKFAKTVKEDKPVTSQDTSWRYVAPELYKNEEYDTKVDVFSFALILQEMIEGYPPFYAKPENEVPKEYVENERPPFKASPKLYAYGLRQLIEECLDEKPHRRPTFRQIIGRLEDINYHLDQKKRWKVQTPTCIQRLEALFRGYRTSPNNRSSRSTPR 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60794g00009 446 ProSiteProfiles Protein kinase domain profile. 121 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60794g00009 446 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Stsc60794g00009 446 CDD STKc_MAP3K-like 163 401 - -
Stsc60794g00009 446 MobiDBLite consensus disorder prediction 1 18 - -
Stsc60794g00009 446 MobiDBLite consensus disorder prediction 1 28 - -
Stsc60794g00009 446 FunFam serine/threonine-protein kinase STY46-like 149 220 - -
Stsc60794g00009 446 SUPERFAMILY Protein kinase-like (PK-like) 163 421 IPR011009 -
Stsc60794g00009 446 Pfam Ankyrin repeats (3 copies) 43 131 IPR002110 GO:0005515
Stsc60794g00009 446 SMART ANK_2a 38 67 IPR002110 GO:0005515
Stsc60794g00009 446 SMART ANK_2a 71 102 IPR002110 GO:0005515
Stsc60794g00009 446 SMART ANK_2a 104 133 IPR002110 GO:0005515
Stsc60794g00009 446 Gene3D - 36 143 IPR036770 -
Stsc60794g00009 446 FunFam Integrin-linked protein kinase family 19 147 - -
Stsc60794g00009 446 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515
Stsc60794g00009 446 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 161 409 - -
Stsc60794g00009 446 PIRSF ILK 2 425 - -
Stsc60794g00009 446 Gene3D Transferase(Phosphotransferase) domain 1 154 410 - -
Stsc60794g00009 446 Pfam Protein tyrosine and serine/threonine kinase 162 400 IPR001245 GO:0004672|GO:0006468
Stsc60794g00009 446 SUPERFAMILY Ankyrin repeat 43 134 IPR036770 -
Stsc60794g00009 446 FunFam Integrin-linked protein kinase family 220 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60794g00009 Stsc-Chr60794 40632 44932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60794g00009 1 416 MAP Kinase Kinase Kinase AT4G18950 64.815 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Stsc60794g00009 PK_Tyr_Ser-Thr 6.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60794g00009 - - gmx:100795964 721.465