Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60794g00003 ATGGAGAATAATAACTTGGATCATTCTTTTTGTTCCAAGCTACTTCTTCTGCTTCTCCTTGGTTCCACTACTTCATTGCTTTTCTTCTCACACTTGGCTTCTGCTGCTGCCACACCAAAACTCAACAATCAAGAAGTGAAGGCATTGAAAGAGATAGGGAAGAAGTTAGGGAAGAAAGATTGGGACTTTGGTGTTGATCCATGCAGTGGAAGAGGGAATTGGAACATGTCTAATAAGAAGGGCTTTCAAAGCTTTGTGGAATGTGATTGCTTTTCCTTCAATAATGATTCTTCTTGCCACCTTGTAAGCATATCATTGAAGGCAGAGAATCTGAGTGGAACTCTTTCACCAGAGTTTTCCAAGCTCCATTATCTCAAGATGTTGGACCTTAGTAGAAACCTCATCACTGGTTATATACCTCAAGAATGGGCTTCCATGAACTTGCTTGATCTCGAATTAATGGGAAACAAATTATCAGGTCCATTCCCCAAAGCTCTCACAAATATTACAACTCTCAGAAACTTGAGTATTGAGGGAAATTACTTTACAGGCCCCATCCCAGCTGAGATTGGAAAATTGATCAATCTAGAAAAAATCATTCTGTCATCAAATGGATTCACTGGAATATTGCCAGCATCACTCTCCAAGTTAACCAAGTTGGATGATCTGAGGCTAAGCGATAATAGCTTCTCCGGCAAGATACCGGATTTCATTAGTAATTGGACATCGATCCAAAAACTGCACATGGAGGGTTGTTCTCTTGAGGGGCCTATACCTTCTAGCATATCTGCATTGACAAGCTTGAGTGATTTGAGGATAAGTGACCTAAAAGGTACTAAAGGCTCTTCTTTCCCACCACTAAGTAACATGAAATCCATGAAGACACTGATACTGAGAAAATGCTTGATCAAAGGAAAGATCCCTGACTATATAGGAAGAATGGAAAAGCTGAAAATGTTAGATTTGAGTTTCAATGGATTGAGTGGGGAGATACCTGAATCTTTTTCCAACCTTGACAAACTTGACTACATGTACTTAACTGGGAACATGCTATCAGGGACTATACCCAGCTGGATCCTTGGAACTAGTAAGAATGTGGATATCTCTTCCAATAACTTCAACTGGGATAGCTCCAATCCAGTTGATTGTCAAAGAGGAGGGAACTTAAACCTTGTTGAGGGATACTCCTCATCTGCAGATACACAAAGTAGGATTCATCCATGCCTAAAAAGGAACTTTCCATGTCCTGCCTCAGTTACCAAATATCAATACTCCATGCACATAAACTGTGGTGGATCGGAAGCAAATGTCAGCAGCCGTGTTTATGAAGCCGATAGAGAAGCAAGAGGTACATCAATGTTGTATTACCATGATCAGGAATGGGCTCTAAGCAGCACTGGAAACTTCATGGACAATGACATTGACTCTGATCCCTTTATTGTGACCAATACTTCAAGACTAGTCAATGTCTCTGCAATCAATTCAGAACTATACACTACAGCTCGTGTTTCGCCGCTTGCTCTTACATACTATGGCCTATGCCTTATCAATGGAAACTACACTGTTGAGCTTCACTTTGCTGAGATTATTTTCATCAATGACAGGTCATTTTACAGTCTCGGAAGGCGAATTTTCGATGTGTACATCCAGGGGAAATTGGTGTTGAAAGAATTTGATATCCAAAAAGCAGCTGGTGGTACTGGCAAGCCAATTGTGAAGAAATTTAATGCAACTGTCACTGAACATACATTGAAAATTCACTTCTACTGGGCTGGAAAGGGCACAACCGGCATACCGACTCGAGGAGTTTATGGACCTCTAATATCTGCTATCTCAGTAGAGCCTAATTTCACACCACCATCAGAAGATGGCCACAGAACCTACATCATGCTGCTAGCTGCTTGTATAGTTGCTGCTGTTGTAGTAGTTGTTCTTATTTTGTTAGGTGTAATGAGGAGAAAGGGATACATAGGAGGAAGTAATGCAGTGTATAAAGAACTTAGGGGCATAGACCTCCAGACAGGATTGTTTACTTTAAAACAAATCAAAGCAGCAACTAAAAACTTTGATGCAGCTAATAAAATTGGTGAAGGTGGCTTTGGTTCTGTTTACAAGGGGCTACTATCAGATGGTACTGTAATTGCAGTAAAGCAACTCTCATCAAAATCGAAGCAAGGAAACCGCGAGTTTGTGAATGAGATAGGAATGATATCAGGACTTCAACATCCAAATCTGGTTAAGCTTTATGGATGTTGTGCTGAGGGTAATCAGTTAATACTGATATATGAGTATATGGAAAACAATTGTTTATCTCGGATGCTATTTGGTAAGGATCCAGAAAGAAAAGTGAAACTGGACTGGCCAACCAGAAAGAAGATTTGTCTTGGTATAGCTAGAGCTTTAGCTTATCTCCATGAAGAGTCTAGAATCAAGATCATTCATAGGGACATAAAGACTAGTAATGTCTTACTAGACAAGGATTTCAATGCCAAAGTTTCAGATTTTGGTTTGGCGAAACTCAATGAAGATGACAAAACCCATGTTAGCACCCGAATTGCAGGAACAATTGGCTATATGGCTCCCGAATATGCAATGCGCGGCTATTTAACTGACAAAGCAGATGTGTATAGCTTCGGGGTGGTTGCATTGGAAATCGTCAGCGGAAAGAGCAACACAAATTTCAGACCTAATGAGGAATTTGTTTATCTTCTTGATTGGGCATATGTCTTGCAAGAAAGAGGAAATCTTCTAGAGCTGGTTGATCCAGATTTGGGTTCAGAATATTCAACTAAAGAGGCAATGGTAATGCTAAATGTGGCTCTACTATGTACTAATGCATCTCCTACACTAAGACCAACAATGTCACAAGCTGTGAGCATGCTTGAAGGCTGGACAGACATTCAAGATATACTTTCTGATCCTGGATATTCAGCACATAGCTCAAATTCAAGATATAAGAGTATGAGGAATCACTTCTGGCAGAATCCAAGTAGATCACAAAGCATGTCAACATATAGTAGTATGTATGCTGATGCTGATTCCTCTAACTCACATATTGAAACAGAAGGGAGTTACCATCTTGTAAAAATTAACTCAGACATGTCAGACAACTGA 3114 0.4004 MENNNLDHSFCSKLLLLLLLGSTTSLLFFSHLASAAATPKLNNQEVKALKEIGKKLGKKDWDFGVDPCSGRGNWNMSNKKGFQSFVECDCFSFNNDSSCHLVSISLKAENLSGTLSPEFSKLHYLKMLDLSRNLITGYIPQEWASMNLLDLELMGNKLSGPFPKALTNITTLRNLSIEGNYFTGPIPAEIGKLINLEKIILSSNGFTGILPASLSKLTKLDDLRLSDNSFSGKIPDFISNWTSIQKLHMEGCSLEGPIPSSISALTSLSDLRISDLKGTKGSSFPPLSNMKSMKTLILRKCLIKGKIPDYIGRMEKLKMLDLSFNGLSGEIPESFSNLDKLDYMYLTGNMLSGTIPSWILGTSKNVDISSNNFNWDSSNPVDCQRGGNLNLVEGYSSSADTQSRIHPCLKRNFPCPASVTKYQYSMHINCGGSEANVSSRVYEADREARGTSMLYYHDQEWALSSTGNFMDNDIDSDPFIVTNTSRLVNVSAINSELYTTARVSPLALTYYGLCLINGNYTVELHFAEIIFINDRSFYSLGRRIFDVYIQGKLVLKEFDIQKAAGGTGKPIVKKFNATVTEHTLKIHFYWAGKGTTGIPTRGVYGPLISAISVEPNFTPPSEDGHRTYIMLLAACIVAAVVVVVLILLGVMRRKGYIGGSNAVYKELRGIDLQTGLFTLKQIKAATKNFDAANKIGEGGFGSVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLYGCCAEGNQLILIYEYMENNCLSRMLFGKDPERKVKLDWPTRKKICLGIARALAYLHEESRIKIIHRDIKTSNVLLDKDFNAKVSDFGLAKLNEDDKTHVSTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNFRPNEEFVYLLDWAYVLQERGNLLELVDPDLGSEYSTKEAMVMLNVALLCTNASPTLRPTMSQAVSMLEGWTDIQDILSDPGYSAHSSNSRYKSMRNHFWQNPSRSQSMSTYSSMYADADSSNSHIETEGSYHLVKINSDMSDN 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60794g00003 1037 SUPERFAMILY RNI-like 112 356 - -
Stsc60794g00003 1037 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 423 616 - -
Stsc60794g00003 1037 Pfam Protein tyrosine and serine/threonine kinase 692 959 IPR001245 GO:0004672|GO:0006468
Stsc60794g00003 1037 SMART serkin_6 689 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60794g00003 1037 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 241 390 - -
Stsc60794g00003 1037 Pfam Leucine rich repeat 292 351 IPR001611 GO:0005515
Stsc60794g00003 1037 Pfam Leucine rich repeat 195 254 IPR001611 GO:0005515
Stsc60794g00003 1037 ProSiteProfiles Protein kinase domain profile. 689 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60794g00003 1037 Gene3D - 421 616 - -
Stsc60794g00003 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Stsc60794g00003 1037 SUPERFAMILY Protein kinase-like (PK-like) 673 998 IPR011009 -
Stsc60794g00003 1037 FunFam Putative LRR receptor-like serine/threonine-protein kinase 765 973 - -
Stsc60794g00003 1037 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 26 1001 - -
Stsc60794g00003 1037 Gene3D Phosphorylase Kinase; domain 1 660 764 - -
Stsc60794g00003 1037 Gene3D Ribonuclease Inhibitor 241 385 IPR032675 -
Stsc60794g00003 1037 Pfam Malectin domain 425 611 IPR021720 -
Stsc60794g00003 1037 CDD STKc_IRAK 695 963 - -
Stsc60794g00003 1037 ProSitePatterns Protein kinases ATP-binding region signature. 695 717 IPR017441 GO:0005524
Stsc60794g00003 1037 Gene3D Transferase(Phosphotransferase) domain 1 765 974 - -
Stsc60794g00003 1037 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 659 764 - -
Stsc60794g00003 1037 Gene3D Ribonuclease Inhibitor 171 240 IPR032675 -
Stsc60794g00003 1037 Gene3D Ribonuclease Inhibitor 46 170 IPR032675 -
Stsc60794g00003 1037 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 47 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60794g00003 Stsc-Chr60794 17328 23601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60794g00003 128 260 Receptor kinase-like Gene Family AT1G07650 26.087 3.20e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc60794g00003 PK_Tyr_Ser-Thr 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60794g00003 - - gmx:100784864 1624.37