Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60788g00005 ATGAACGTGCAACACATTACTACCAAGAACTTTGACAACTACATTAAAGGTTCTGACTTCCATGAGATTTTCGAAGTACTAGGAGATGGCATCTTTAACAGTGATTCACACAAATGGAAGCGCAACAGGGACATACTACACTCATTGTTCAGAAAAAGCTCGTTTGAGAGTTTAGTTGTGAAAACAATTCATAAGAAGCTCGAGAGTTGTCTAGTTCCACTTCTGAATGATGTATCAGAATTAAGAACTATTGTGGACTTGCAAGACATCTTTCAGAGATTCAGTTTTGACAACATCTGCTCCATAGTGTTGGGATCTGATCCTAACTCCCTTCCTAACAAGCTCATTGTGTTCCCGGAAGTTACTTTCGAGAAAGCTTTCAACAAGGTTGAGGATGTAATTTTCTACAGACATATTGTCCCAAGATTTTTGTGGAAGCTTCAGAAATGGCTCAAAATTGGAACAGAGAAGAACTACAGTGAATGTGAAAAGATAGTTAATCAATTCTTGCATCGATGTATATCATCTACATTCCAAGAGCAAAACAAATTCAACTGCACCAAAGATGATGATGAAGCAAACTTTAACATGCTTAAAGCTCTTGTGGAGGAAAGTGGAACGGAACAAATAGATCACAAGTTTCTAAGAGACAGTGCAATTAGTCTCTTAGCAGCAGGAAGGGATACAATTAGTTCAAGCCTCTGTTGGTTTTTCTGGTTGGTTTCGACCCACCCTGTTGTTGAAGCCAAGATCCTTGAAGAAATTAGAGCAAACTTTATAACCAAGGAAGAAAATTGGCCCATCAATTCAAGGGTGGAAAATCTAAACAAGCTAGTTTACCTGCATGGAGCTTTGTGTGAATCATTGAGACTTTTTCCTCCGATTCCTTTTGAGCATAAATCTGCAGTTGAATCTGATATACTTCCGAGTGGGGATCGTGTTAATGCAAATACTATGATACTTTACTCTTTGTACTCAATGGGAAGATTGGAACAAACATGGGGAGAAGATTGCTTGGAGTTTAAGCCAGAAAGGTGGATTTCTGAAAAGGGATGCAACATACACATACCATCTTACAAGTTCATAGCTTTCAATGCAGGCCCAAGAAGCTGTTTGGGTAAAAATATAAGCTTTATTCAGTTGAAGATCGTCGCCATTGCTTTGCTGAGGAATTTTCAATTTGAGGTGGTGGAAGGGCACAATGTGTCTCCAAGTATTTCTGTTGTTCTTCATATGAAACATGGCTTGAAGGTCAAGCCGCACCATTTCTTCCCCTTTCTCTTCCTCTGCTATTACCCTCTTCCTCCATTGCTTCTCCTTCTGCCGCTTCTGTCATTGCTGCCGTTGCCTCATCCAGATCTGGCACCTACCGCCGCCGCCGTTCACTCCCTCTCTTCCTCACTTAGTCCAGATCTGCGTCTGTCGCCACCTCTAATGTGA 1440 0.4083 MNVQHITTKNFDNYIKGSDFHEIFEVLGDGIFNSDSHKWKRNRDILHSLFRKSSFESLVVKTIHKKLESCLVPLLNDVSELRTIVDLQDIFQRFSFDNICSIVLGSDPNSLPNKLIVFPEVTFEKAFNKVEDVIFYRHIVPRFLWKLQKWLKIGTEKNYSECEKIVNQFLHRCISSTFQEQNKFNCTKDDDEANFNMLKALVEESGTEQIDHKFLRDSAISLLAAGRDTISSSLCWFFWLVSTHPVVEAKILEEIRANFITKEENWPINSRVENLNKLVYLHGALCESLRLFPPIPFEHKSAVESDILPSGDRVNANTMILYSLYSMGRLEQTWGEDCLEFKPERWISEKGCNIHIPSYKFIAFNAGPRSCLGKNISFIQLKIVAIALLRNFQFEVVEGHNVSPSISVVLHMKHGLKVKPHHFFPFLFLCYYPLPPLLLLLPLLSLLPLPHPDLAPTAAAVHSLSSSLSPDLRLSPPLM 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60788g00005 479 CDD CYP86A 2 416 - -
Stsc60788g00005 479 PANTHER CYTOCHROME P450 2 418 - -
Stsc60788g00005 479 PRINTS P450 superfamily signature 283 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00005 479 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00005 479 PRINTS P450 superfamily signature 225 242 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00005 479 PRINTS P450 superfamily signature 362 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00005 479 Pfam Cytochrome P450 9 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00005 479 SUPERFAMILY Cytochrome P450 3 420 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00005 479 Gene3D Cytochrome P450 1 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00005 479 PRINTS E-class P450 group I signature 361 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00005 479 PRINTS E-class P450 group I signature 371 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00005 479 PRINTS E-class P450 group I signature 214 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00005 479 PRINTS E-class P450 group I signature 234 260 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00005 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 364 373 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60788g00005 Stsc-Chr60788 36480 39819 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60788g00005 2 418 Cytochrome P450 AT2G23180 44.575 1.43e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60788g00005 - - gmx:100785815 507.294