Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60788g00003 | ATGCCAAATTTACCCTTGTTTGGTATGCTACCTGCTATGTTGTGGAATTTGTCTAATATTCATGAATACTTTACCATAACTTTGAAACAATCAGGAGGTTCTGAGTTCCATCAGAAGTTTGAAGTTCTTGGAGATGGGATCTTCAATTCTGATTCACACATCTGGAAGCACCAAAGGGACATATTACAATCATTGTTAAACCAAAACATCTTCCAGAATTTCTTTACAAAATCCATTCATAAGAAGTTGGAGGGTTGCCTACTTCCACTTTTGAATGATGCTTCGGAATCAAAAACTATTGTGGACTTGCAAAACATCTTTCAGAGGTTCACTTTTGATCACATTTGCACCATGATGTTGGCATTTGATCCCAATTGCCTTCCCAGCAAGTTCACTGAATTTCAAGAGGTTGTTTCCGAAAAAGCTTTTAACAACATAGGGGATGTAATTCTCAATAGGCACTTTTTCCCAAGAACCTTATGGAAGCTGCAAAAATGGCTCCAAATTGGATCCGAGAAGCACTCAATATCATCCCAACAAATTATTGATCAGTTCTTGCATGAGTGTATATCATCCAATCTTGATGAAGACAAGAGCAGAGACATCAATTGCACTCAAGAAGATGAACCAAACTTCAACATGTTTAAAGCTCTTGTGAAGGAAAGTGCAATGGAACAAACAGATTACAAGTTTCTAAGTGACACTGCAATTAATCTTCTGTTGGCAGGAAGGGACACAGTCAGTGCAGGTCTCAGTTGGTTTTTCTGGCTTGTTTCGACTCACCCTAACGTTGAAACCAAGATCCTTGAAGAAATCAGAGCAAACTTCAAAACTAGTGAAGAAAATTGGCTCAGTTCAGGGGTAGAAAACCTTAATAAGCTAGTTTACTTGCATGGAGCTATATCTGAAGCTTTGAGGCTTTTTCCTCCGGTGCCATTTGAGCACAAATGTGCAATCAAATCTGATATACTTCCTAGTGGAGATCATATTAGTCCAAATACTATGATCTATTACTCCCTATATTCAATGGGAAGGATGGAACAAATATGGGGTAACGATTGCTTGGAATTTAAACCAGAAAGGTGGATTTTGGAAAGAGAAGGTCGCAGTAATAATATAGACATACCATCATATAAGTTTATAGCTTTCAATGCAGGGCCAAGAAGTTGTCTGGGTAAAAGCATTAGCTTTATCCAAATGAAGATTGTTGCCATTGCTATGCTGTGGAACTTTCACTTCCAAGTGGTGGAAGGGCATTTAGTGTGTCCAAGAGTTTCTGTTATAAGTCACATGAAACATGGCTTGAAAGTTCATGTTACCAAAAGAAGCAATTGA | 1335 | 0.3813 | MPNLPLFGMLPAMLWNLSNIHEYFTITLKQSGGSEFHQKFEVLGDGIFNSDSHIWKHQRDILQSLLNQNIFQNFFTKSIHKKLEGCLLPLLNDASESKTIVDLQNIFQRFTFDHICTMMLAFDPNCLPSKFTEFQEVVSEKAFNNIGDVILNRHFFPRTLWKLQKWLQIGSEKHSISSQQIIDQFLHECISSNLDEDKSRDINCTQEDEPNFNMFKALVKESAMEQTDYKFLSDTAINLLLAGRDTVSAGLSWFFWLVSTHPNVETKILEEIRANFKTSEENWLSSGVENLNKLVYLHGAISEALRLFPPVPFEHKCAIKSDILPSGDHISPNTMIYYSLYSMGRMEQIWGNDCLEFKPERWILEREGRSNNIDIPSYKFIAFNAGPRSCLGKSISFIQMKIVAIAMLWNFHFQVVEGHLVCPRVSVISHMKHGLKVHVTKRSN | 444 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60788g00003 | 444 | Gene3D | Cytochrome P450 | 9 | 444 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60788g00003 | 444 | CDD | CYP86A | 33 | 435 | - | - | |
Stsc60788g00003 | 444 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 383 | 392 | IPR017972 | GO:0005506|GO:0016705 | |
Stsc60788g00003 | 444 | PANTHER | CYTOCHROME P450 | 30 | 437 | - | - | |
Stsc60788g00003 | 444 | SUPERFAMILY | Cytochrome P450 | 3 | 442 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60788g00003 | 444 | PRINTS | E-class P450 group I signature | 231 | 248 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60788g00003 | 444 | PRINTS | E-class P450 group I signature | 251 | 277 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60788g00003 | 444 | PRINTS | E-class P450 group I signature | 380 | 390 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60788g00003 | 444 | PRINTS | E-class P450 group I signature | 298 | 316 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60788g00003 | 444 | PRINTS | E-class P450 group I signature | 390 | 413 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60788g00003 | 444 | PRINTS | P450 superfamily signature | 390 | 401 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60788g00003 | 444 | PRINTS | P450 superfamily signature | 242 | 259 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60788g00003 | 444 | PRINTS | P450 superfamily signature | 381 | 390 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60788g00003 | 444 | PRINTS | P450 superfamily signature | 299 | 310 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60788g00003 | 444 | Pfam | Cytochrome P450 | 41 | 423 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60788g00003 | Stsc-Chr60788 | 22483 | 24119 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60788g00003 | 1 | 444 | Cytochrome P450 | AT2G23180 | 40.452 | 1.39e-127 | 377 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60788g00003 | - | - | ahf:112735737 | 561.607 |