Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60788g00003 ATGCCAAATTTACCCTTGTTTGGTATGCTACCTGCTATGTTGTGGAATTTGTCTAATATTCATGAATACTTTACCATAACTTTGAAACAATCAGGAGGTTCTGAGTTCCATCAGAAGTTTGAAGTTCTTGGAGATGGGATCTTCAATTCTGATTCACACATCTGGAAGCACCAAAGGGACATATTACAATCATTGTTAAACCAAAACATCTTCCAGAATTTCTTTACAAAATCCATTCATAAGAAGTTGGAGGGTTGCCTACTTCCACTTTTGAATGATGCTTCGGAATCAAAAACTATTGTGGACTTGCAAAACATCTTTCAGAGGTTCACTTTTGATCACATTTGCACCATGATGTTGGCATTTGATCCCAATTGCCTTCCCAGCAAGTTCACTGAATTTCAAGAGGTTGTTTCCGAAAAAGCTTTTAACAACATAGGGGATGTAATTCTCAATAGGCACTTTTTCCCAAGAACCTTATGGAAGCTGCAAAAATGGCTCCAAATTGGATCCGAGAAGCACTCAATATCATCCCAACAAATTATTGATCAGTTCTTGCATGAGTGTATATCATCCAATCTTGATGAAGACAAGAGCAGAGACATCAATTGCACTCAAGAAGATGAACCAAACTTCAACATGTTTAAAGCTCTTGTGAAGGAAAGTGCAATGGAACAAACAGATTACAAGTTTCTAAGTGACACTGCAATTAATCTTCTGTTGGCAGGAAGGGACACAGTCAGTGCAGGTCTCAGTTGGTTTTTCTGGCTTGTTTCGACTCACCCTAACGTTGAAACCAAGATCCTTGAAGAAATCAGAGCAAACTTCAAAACTAGTGAAGAAAATTGGCTCAGTTCAGGGGTAGAAAACCTTAATAAGCTAGTTTACTTGCATGGAGCTATATCTGAAGCTTTGAGGCTTTTTCCTCCGGTGCCATTTGAGCACAAATGTGCAATCAAATCTGATATACTTCCTAGTGGAGATCATATTAGTCCAAATACTATGATCTATTACTCCCTATATTCAATGGGAAGGATGGAACAAATATGGGGTAACGATTGCTTGGAATTTAAACCAGAAAGGTGGATTTTGGAAAGAGAAGGTCGCAGTAATAATATAGACATACCATCATATAAGTTTATAGCTTTCAATGCAGGGCCAAGAAGTTGTCTGGGTAAAAGCATTAGCTTTATCCAAATGAAGATTGTTGCCATTGCTATGCTGTGGAACTTTCACTTCCAAGTGGTGGAAGGGCATTTAGTGTGTCCAAGAGTTTCTGTTATAAGTCACATGAAACATGGCTTGAAAGTTCATGTTACCAAAAGAAGCAATTGA 1335 0.3813 MPNLPLFGMLPAMLWNLSNIHEYFTITLKQSGGSEFHQKFEVLGDGIFNSDSHIWKHQRDILQSLLNQNIFQNFFTKSIHKKLEGCLLPLLNDASESKTIVDLQNIFQRFTFDHICTMMLAFDPNCLPSKFTEFQEVVSEKAFNNIGDVILNRHFFPRTLWKLQKWLQIGSEKHSISSQQIIDQFLHECISSNLDEDKSRDINCTQEDEPNFNMFKALVKESAMEQTDYKFLSDTAINLLLAGRDTVSAGLSWFFWLVSTHPNVETKILEEIRANFKTSEENWLSSGVENLNKLVYLHGAISEALRLFPPVPFEHKCAIKSDILPSGDHISPNTMIYYSLYSMGRMEQIWGNDCLEFKPERWILEREGRSNNIDIPSYKFIAFNAGPRSCLGKSISFIQMKIVAIAMLWNFHFQVVEGHLVCPRVSVISHMKHGLKVHVTKRSN 444
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc60788g00003 444 Gene3D Cytochrome P450 9 444 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00003 444 CDD CYP86A 33 435 - -
Stsc60788g00003 444 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 383 392 IPR017972 GO:0005506|GO:0016705
Stsc60788g00003 444 PANTHER CYTOCHROME P450 30 437 - -
Stsc60788g00003 444 SUPERFAMILY Cytochrome P450 3 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00003 444 PRINTS E-class P450 group I signature 231 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00003 444 PRINTS E-class P450 group I signature 251 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00003 444 PRINTS E-class P450 group I signature 380 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00003 444 PRINTS E-class P450 group I signature 298 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00003 444 PRINTS E-class P450 group I signature 390 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00003 444 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00003 444 PRINTS P450 superfamily signature 242 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00003 444 PRINTS P450 superfamily signature 381 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00003 444 PRINTS P450 superfamily signature 299 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00003 444 Pfam Cytochrome P450 41 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc60788g00003 Stsc-Chr60788 22483 24119 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60788g00003 1 444 Cytochrome P450 AT2G23180 40.452 1.39e-127 377
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60788g00003 - - ahf:112735737 561.607