Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60788g00002 ATGGAGTCCTCAGAGTTTATTGCTATTTTTGTAGCAATCGCCTCATTCTTCTTCATCCACACTTGGTGGTCTAATAGAAATAACCCCATCATAAATTGGCCCTTCTTTGGTATGCTACCGGCAGTTTTATACAATCTTTCCAATATCCATGATTATGCAACCACCGTTCTGAAGCACTACGGAGGTACTTTCATGTTCAAAGGTCCATGGCTCACAAACTCCAACTTTTTCATCACCACTGATCCTGTGAACGTGCAACACATTACTACCAAGAACTTTGACAACTACATTAAAGGGTCTCACTTCTATGAGATTTTTGAAATCATGGGAGATGGCATCTTTAACATTGATTCCCACAAATGGAAACACAGCAGGGACATACTACAATCATTGTTCAGACAAAACTCGTTTGACAGTTTAGTCGTGAAAGCGATTCATAAGAATCTCATGGGTTGCCTGATTCCACTTCTCAATGATGTATCGGAATTACGAACTGTCGTGGACTTACAAGACATCTTTCAAAGATTCAGCTTTGACAACATCTGCTCCATAGTGTTGGGCTTTGATCCTAAATCCCTTCCTAACAAGCTCACCACCAAGTTCCCAGAAGTCCTTTTCGAGAATGCTTTCAACAGGATGGAGAACGCAATGTTCTACAGACACGTTTTCCCAAAATTTTTGTGGAAGCTTCAAAAATTGCTCCAAATTGGACAAGAGAAGAACTACAGTGAATGTAAGAAAATAATTGACCAATTCTTGCATCAGTGTATATCATCCACATTCCAAGAGCAAAGCAAATTCAACTGCGCCGAAGATGATGATGATGAATCGAGCTTTAACATGCTTAAAGCTCTTGCAGAGGAAAGTGGAATGAAACAAATAAATCACAAGTTTCTAAGAGACAGTGCACTCAGTCTCTTAGCAGCAGGAAGGGATACAATTAGTTCAAGTCTCAGTTGGTTTTTCTGGCTGGTTTCAACCCACCCTATTGTTGAAGCCAAGATCCTTGAAGAAATTAGAGCAAACTTTATTACCAAAGAAGAAAATTGGCTCATCAATTCAAGGGTGGAGGAAAATCTAAACAAGCTAGTTTACCTGCATGGAGCTTTATGCGAATCATTGAGACTTTTTCCTCCACTCCCTTTTGAGCACAAATCTGCAGTTAAACCTGATATACTTCCTAGTGGGGATCGTGTTAATGCAAATACTATGATACTTTACTCTCTATACTCAATGGGAAGAATAGAACAAATATGGGGAGAAGATTGCTTGAAATTTAAGCCAGAAAGATGGGTTTCTGAAAAAGAAAACAACATACACGTACCATCTTACAAGTTCATAGCTTTCCAATCAGGCCCAAGAAGTTGCTTGGGTAAAAATATAAGCTTTATTCAGATGAAGATCGTCGCCATTGCTTTGCTGCAGAATTTTCAGTTTGAGGTAATGGAAGGGCATGATGTGCGTCCATGTCTTTCTGTTATTCTTCACATGAAACATGGCCTGAAGGTCAAGGTTACTAAAAGAGGTATTATTAATTAA 1539 0.3905 MESSEFIAIFVAIASFFFIHTWWSNRNNPIINWPFFGMLPAVLYNLSNIHDYATTVLKHYGGTFMFKGPWLTNSNFFITTDPVNVQHITTKNFDNYIKGSHFYEIFEIMGDGIFNIDSHKWKHSRDILQSLFRQNSFDSLVVKAIHKNLMGCLIPLLNDVSELRTVVDLQDIFQRFSFDNICSIVLGFDPKSLPNKLTTKFPEVLFENAFNRMENAMFYRHVFPKFLWKLQKLLQIGQEKNYSECKKIIDQFLHQCISSTFQEQSKFNCAEDDDDESSFNMLKALAEESGMKQINHKFLRDSALSLLAAGRDTISSSLSWFFWLVSTHPIVEAKILEEIRANFITKEENWLINSRVEENLNKLVYLHGALCESLRLFPPLPFEHKSAVKPDILPSGDRVNANTMILYSLYSMGRIEQIWGEDCLKFKPERWVSEKENNIHVPSYKFIAFQSGPRSCLGKNISFIQMKIVAIALLQNFQFEVMEGHDVRPCLSVILHMKHGLKVKVTKRGIIN 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60788g00002 512 Gene3D Cytochrome P450 21 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00002 512 SUPERFAMILY Cytochrome P450 30 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00002 512 CDD CYP86A 64 501 - -
Stsc60788g00002 512 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00002 512 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00002 512 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00002 512 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00002 512 Pfam Cytochrome P450 32 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00002 512 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00002 512 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00002 512 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00002 512 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00002 512 PANTHER CYTOCHROME P450 22 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60788g00002 Stsc-Chr60788 15955 17493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60788g00002 6 508 Cytochrome P450 AT2G23180 42.248 1.12e-154 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60788g00002 - - cave:132181006 572.392